Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3363 ATGGTGAGCCAAAGGCAGCGACTTGCTCGGAAAAAATTCAAAGTAGAGCACCCTGACCTCTTCCCAAAACCAGAACCCACGCCCCCAAAAGACCCTGACAACAAGAAGAAGAAGAAACCCAAGAATTTGCTAAAGCCCAAAAAGGGAGATTCCAAAGAACCCTTTAAAAGGAGTTTCAGAAAACACCCACTTAGAGTTCCTGGCATGAAGCCTGGTGATAGTTGTTTCATCTGCAAAGCTAAAGACCATATTGCTAAGTCCTGTCCTGAGAAAGCTGAGTGGGAAAAGAATAAGATATGTTTGCGTTGTAGGCAGCGTGGTCATAGAGCTAAGAATTGCCCTCAGGTGAAAGATGGCGCCAGTGATTCCAAAATATGCTATAATTGTGGAGAAACTGGACACTCACTTTCAAAATGTCCACAGCCTCTTCAAGATGGGGGAACAAAATTTGCTGAGTGCTTTGTGTGTAAAGGACGTGGGCACTTGAGCAAAGACTGCCCTCAAAATGTCCATGGCATCTATCCAAAGGGAGGTTGTTGTAAGATATGTGGTGGTGTGACGCATTTGGCAAAGGATTGCCCTGACAAAGGGAGAAAAGAGTCTGCTGCTGCTTATGGGTCTACGAATACTGCCACCGAAGGAGGGCCCAGAAATCAAGTGACCAAACTTGTGAGCGGGGATGATCTTGAGGATGACTTCATTGCAGATGAAGCACCTAATGTTGAGAAGCCCTCTAAATCTAAAAACGTTAATGAAAAACCAAAGAAGGTTCCCAAAGTTGTAAAATTCTATTGA 795 0.444 MVSQRQRLARKKFKVEHPDLFPKPEPTPPKDPDNKKKKKPKNLLKPKKGDSKEPFKRSFRKHPLRVPGMKPGDSCFICKAKDHIAKSCPEKAEWEKNKICLRCRQRGHRAKNCPQVKDGASDSKICYNCGETGHSLSKCPQPLQDGGTKFAECFVCKGRGHLSKDCPQNVHGIYPKGGCCKICGGVTHLAKDCPDKGRKESAAAYGSTNTATEGGPRNQVTKLVSGDDLEDDFIADEAPNVEKPSKSKNVNEKPKKVPKVVKFY 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3363 264 SUPERFAMILY Retrovirus zinc finger-like domains 68 116 IPR036875 GO:0003676|GO:0008270
Mibi01g3363 264 MobiDBLite consensus disorder prediction 204 264 - -
Mibi01g3363 264 Gene3D - 67 121 - -
Mibi01g3363 264 Gene3D - 149 210 - -
Mibi01g3363 264 MobiDBLite consensus disorder prediction 12 38 - -
Mibi01g3363 264 MobiDBLite consensus disorder prediction 236 264 - -
Mibi01g3363 264 MobiDBLite consensus disorder prediction 1 67 - -
Mibi01g3363 264 SUPERFAMILY Retrovirus zinc finger-like domains 119 169 IPR036875 GO:0003676|GO:0008270
Mibi01g3363 264 Gene3D - 122 148 - -
Mibi01g3363 264 ProSiteProfiles Zinc finger CCHC-type profile. 153 168 IPR001878 GO:0003676|GO:0008270
Mibi01g3363 264 ProSiteProfiles Zinc finger CCHC-type profile. 126 141 IPR001878 GO:0003676|GO:0008270
Mibi01g3363 264 SMART c2hcfinal6 99 115 IPR001878 GO:0003676|GO:0008270
Mibi01g3363 264 SMART c2hcfinal6 152 168 IPR001878 GO:0003676|GO:0008270
Mibi01g3363 264 SMART c2hcfinal6 74 90 IPR001878 GO:0003676|GO:0008270
Mibi01g3363 264 SMART c2hcfinal6 125 141 IPR001878 GO:0003676|GO:0008270
Mibi01g3363 264 SMART c2hcfinal6 179 195 IPR001878 GO:0003676|GO:0008270
Mibi01g3363 264 MobiDBLite consensus disorder prediction 204 219 - -
Mibi01g3363 264 PANTHER OS04G0555800 PROTEIN 1 263 - -
Mibi01g3363 264 FunFam Zinc finger CCHC-type-containing 9 150 203 - -
Mibi01g3363 264 Pfam Zinc knuckle 100 115 IPR001878 GO:0003676|GO:0008270
Mibi01g3363 264 Pfam Zinc knuckle 125 141 IPR001878 GO:0003676|GO:0008270
Mibi01g3363 264 Pfam Zinc knuckle 153 168 IPR001878 GO:0003676|GO:0008270
Mibi01g3363 264 ProSiteProfiles Zinc finger CCHC-type profile. 100 115 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3363 Mibi-ChrMibi01 58994646 58997394 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3363 100 196 C2H2 Transcription Factor Family AT5G20220 28.947 1.47e-06 47.0