Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3353 ATGCCACCCCGGCGGCGCCACCCCACATCGCCGCCTTCTGCCGCGGTTCCCGGTGACCCATACCCACCATCTTGCTCCCTCTTCTTCCTCTCCTTCCTCTCTTTTCTTCGCCGCCGTCGCAACACCAAACGCACCACCCCTTCCTCCGATTCCGATTCAAAACCCCCTCTTCATAAATTCTCCTTCTCCTCCCTCCGCCTCGCCACCTCTTCCTTCTCCACCCAAATCGGCTCCGGTGGGTCCGGACCCGTTTTCTCCGGGTCCCTCCCTCTGACCCGAAAGCCCATCGCCGTTAAACTCATGGACTCTGCTTCTCTTCAAGGTGAACGTGAGTTTCATAACGAGCTTTTCTTCGCTTCCAAGCTTTGCTCCCAGAACGTCGTCGTCGCTATAGGATCCTCCTATGAGAGGAATCGCCGGAGATTCTTGCTGGTTTATGATCTTATGGCTAATGGGAATCTTCAGGATGCTCTGTTACGAAGGAAAATCCCTGAGCTTATGGATTGGAAGAAACGTTTTGATATAATTGTTGATATAGCTAAGGGAATTTGTTATCTTCATTCCTGTGATCCGCCTGTGATTCATGGAGATATCAAGCCGAGTAATGTTCTTCTGGATGATTCTTTCTCTGCGAAGATTTCTGATTTTGGGTTGGCTCGGTTGAAATCGGAAACCCATTACGATTTTGAGATTTTCAGTGGGATTGATTATTCTGGGTCGGTTGTGGAGGAGACAGAGAGTGTGAACACTGGTTTTGAGGAGCAAAATTATCCCATTTCGGAGACGGAGAATCGAGAGAGGGGAAGGAAGAAAGGTGAGAAATTGAAGAGCAGATCAATGAAAGATTGGTGGAGGAAGGAAGACGATGATGAGAAGAAAAAGAGCAGGAAGCAAAACAAGAAAAAGGGATTTTACAGTGATGAAGAAGATTTCAACAGAGAGGCAAAGAAGAAGAAGAAGAAGAAGAAGAAGAACAGAGGAAGAAGCATCGATTGGTGGTTCGATGGGATTAGCAGGAATAGCCATGAATCTTTCAGCGGAGAAATTCAAAATAATACGCCAAGTTTGAAAGGAACAGTTTGTTATGTAGCACCAGAGTACGGCCATGGGGGAGAAATAACAGAGGGATGTGATGTGTACAGTTTTGGGGTGTTGTTACTTGTGATGGTTTCAGGAAGAAGGCCGATTGAGATGGTGAATGGTTCGCCATTGTCGGAGATTCAGAAAGGGAATTTGTTGTATTGGGCACGACATTGTGCGAGAAATGGGAAGCTAGAAGAAGTGATTGATAAGAGAATGAGTATGAAAATGGGGGAGAAAGAGAAAGAGGAGGCTCTGTTATGTATTAAAGTGGCTTTGCTTTGTTTGGTGAAGAATGTGTCTCGTCGGCCAACAATGGAAGATGTTGTGAGAATGATCTCTGGTGAGATGGAGCCGCCGCAATTGCCGACGGAGTATTCTTCTTCATCGCCTTCTCCGTTTCCGTTCAAGTCTGGGAAAAACGTTCTGTGA 1512 0.4676 MPPRRRHPTSPPSAAVPGDPYPPSCSLFFLSFLSFLRRRRNTKRTTPSSDSDSKPPLHKFSFSSLRLATSSFSTQIGSGGSGPVFSGSLPLTRKPIAVKLMDSASLQGEREFHNELFFASKLCSQNVVVAIGSSYERNRRRFLLVYDLMANGNLQDALLRRKIPELMDWKKRFDIIVDIAKGICYLHSCDPPVIHGDIKPSNVLLDDSFSAKISDFGLARLKSETHYDFEIFSGIDYSGSVVEETESVNTGFEEQNYPISETENRERGRKKGEKLKSRSMKDWWRKEDDDEKKKSRKQNKKKGFYSDEEDFNREAKKKKKKKKKNRGRSIDWWFDGISRNSHESFSGEIQNNTPSLKGTVCYVAPEYGHGGEITEGCDVYSFGVLLLVMVSGRRPIEMVNGSPLSEIQKGNLLYWARHCARNGKLEEVIDKRMSMKMGEKEKEEALLCIKVALLCLVKNVSRRPTMEDVVRMISGEMEPPQLPTEYSSSSPSPFPFKSGKNVL 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3353 503 MobiDBLite consensus disorder prediction 259 274 - -
Mibi01g3353 503 SUPERFAMILY Protein kinase-like (PK-like) 46 473 IPR011009 -
Mibi01g3353 503 SMART serkin_6 70 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g3353 503 Pfam Protein kinase domain 352 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g3353 503 Pfam Protein tyrosine and serine/threonine kinase 72 226 IPR001245 GO:0004672|GO:0006468
Mibi01g3353 503 MobiDBLite consensus disorder prediction 481 496 - -
Mibi01g3353 503 Gene3D Transferase(Phosphotransferase) domain 1 149 255 - -
Mibi01g3353 503 Gene3D Transferase(Phosphotransferase) domain 1 330 481 - -
Mibi01g3353 503 MobiDBLite consensus disorder prediction 480 503 - -
Mibi01g3353 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Mibi01g3353 503 MobiDBLite consensus disorder prediction 286 308 - -
Mibi01g3353 503 ProSiteProfiles Protein kinase domain profile. 70 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g3353 503 MobiDBLite consensus disorder prediction 1 19 - -
Mibi01g3353 503 Gene3D Phosphorylase Kinase; domain 1 57 148 - -
Mibi01g3353 503 MobiDBLite consensus disorder prediction 252 274 - -
Mibi01g3353 503 FunFam Os07g0541700 protein 149 231 - -
Mibi01g3353 503 MobiDBLite consensus disorder prediction 1 22 - -
Mibi01g3353 503 PANTHER OS07G0586332 PROTEIN 27 251 IPR044576 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3353 Mibi-ChrMibi01 58847755 58849266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3353 352 480 Receptor kinase-like Gene Family AT2G43700 32.558 2.23e-14 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Mibi01g3353 PK_Tyr_Ser-Thr 1.1e-23 CL0016