Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3352 ATGTTTCCTTCACATCAACGAGGCAACAATAATGAGATGGTCATCGAATTTTCTAGCCGTCCCCACCACCACCAACACCAGGAGGAAATCTCAGAAGATCTCATTCTGGATGCTCATGCTCATCATCATCATCATGCTTCTCTGGAAGACATCATCAATTTCTCTGATAAAAAATTACAACAAGCAAGTACCAACAAGCCCAAGAAGCTACTTTATGAGTCCTCTTCTGGTGATAAGATCAACCATTATCGAAATTTTGATAAGAAGAACGAGAAGCTCATTCACAGAGAGATTGAGAGGCAAAGAAGGCAAGAAATGGCTACCCTCTATGCATCCCTTAGATCTCTTCTTCCCCTAGAGTTCATCAAGGGAAAGCGGTCAATATCAGATCACATGAATGAGGCGAAGAACTACATAAAGCACCTGCAAAAGAGAATCAAAGAACTGAGTGCCAAGAGAGACGAACTGAAGAAACTAACAGAGAATTCTTCAAATCCAGAAGAATCACTACACGAGTGTGAAAAGTACACATGTAGTGGCTTTTTCAGTGTTCACAAGATTAATAACGATAATAATGGTGCTGTTGGAATAGAAGTTTCTAGTTCATTGGAAGAGGAAAGTTTGTTTCCCCTTTCAAAATTTCTTAAACTGATGCTTGAAGAAGGACTTGAAGTTGTTAACTGTGTTACCAGTCAAGTCAATGGAAGATTAATTCACAGTGTTCAGTGTGAGGTTAGTAACAGTTACGACGGCCGTGTAGACCCTCCCGCGCTGAGAAGGAAAATTGCGAATCTAGTTCCCTCTTTCAAATGTTCTGACTAA 822 0.4027 MFPSHQRGNNNEMVIEFSSRPHHHQHQEEISEDLILDAHAHHHHHASLEDIINFSDKKLQQASTNKPKKLLYESSSGDKINHYRNFDKKNEKLIHREIERQRRQEMATLYASLRSLLPLEFIKGKRSISDHMNEAKNYIKHLQKRIKELSAKRDELKKLTENSSNPEESLHECEKYTCSGFFSVHKINNDNNGAVGIEVSSSLEEESLFPLSKFLKLMLEEGLEVVNCVTSQVNGRLIHSVQCEVSNSYDGRVDPPALRRKIANLVPSFKCSD 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3352 273 FunFam Transcription factor bHLH126 82 170 - -
Mibi01g3352 273 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 88 157 IPR036638 GO:0046983
Mibi01g3352 273 Pfam Helix-loop-helix DNA-binding domain 94 143 IPR011598 GO:0046983
Mibi01g3352 273 CDD bHLH_AtORG2_like 91 167 - -
Mibi01g3352 273 Coils Coil 132 162 - -
Mibi01g3352 273 SMART finulus 96 148 IPR011598 GO:0046983
Mibi01g3352 273 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 90 142 IPR011598 GO:0046983
Mibi01g3352 273 Gene3D - 83 175 IPR036638 GO:0046983
Mibi01g3352 273 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 72 265 IPR015660 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3352 Mibi-ChrMibi01 58825796 58827097 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3352 95 263 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 44.318 1.83e-37 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi01g3352 HLH 2.4e-09 No_clan