Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3350 ATGAGCAGAGGGAGAAAGCATATTACAATGCCTCCTTCTTCGGACAACAATTATGATGAGGCAAGTGTTTGTGATGATGAGAAGAAGATCATTCGTAGGGAAACTGAAAGGAAAAGAAGGCTTCAGATGACCTCCCTCTGTGAATCACTCAGATCTTTGCTACCTTTTGAGCTCATCAAGGGAAAGCGTTCAGTGTCTGATCACCTAGGGGAGGCTGCAAGTTATATAAAAGTTTTGGAGGAGAAAACCCAAGAACTCCAAATCAAGAGAGATAAGCTCAAACAAGAGGCCAATCCAAGTTTGTTTGGTGCTGGAATAGATAATGAAAGTTCAAGCCATTCAAATTTTGTTAAGTGTGTAAGCATTTCGCCTTTTCCAGGTGGCATTGAAATTTCTGTAGACAGTAGCTTTGAGGAAAACAGTTTCCCACTTTCACTCTTGCTGGAAATATTGATGCAAGAAGGATGTAATGTTGTGAGCTGTGTGTCCACCCAAGTGAATGGAAGGCTATACCACTCTATTCAGGCTGAGGTGGATAACTTGGAAAGCCTTGATATAGCTGGGTTGGAACAGAAACTGAATGGTGCAGTATTCTGGTCGATCAAGGATTTGCTTTGA 618 0.4175 MSRGRKHITMPPSSDNNYDEASVCDDEKKIIRRETERKRRLQMTSLCESLRSLLPFELIKGKRSVSDHLGEAASYIKVLEEKTQELQIKRDKLKQEANPSLFGAGIDNESSSHSNFVKCVSISPFPGGIEISVDSSFEENSFPLSLLLEILMQEGCNVVSCVSTQVNGRLYHSIQAEVDNLESLDIAGLEQKLNGAVFWSIKDLL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3350 205 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 20 193 IPR015660 -
Mibi01g3350 205 CDD bHLH_AtORG2_like 28 96 - -
Mibi01g3350 205 Coils Coil 76 96 - -
Mibi01g3350 205 SMART finulus 33 85 IPR011598 GO:0046983
Mibi01g3350 205 MobiDBLite consensus disorder prediction 1 21 - -
Mibi01g3350 205 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 27 79 IPR011598 GO:0046983
Mibi01g3350 205 Pfam Helix-loop-helix DNA-binding domain 32 79 IPR011598 GO:0046983
Mibi01g3350 205 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 26 99 IPR036638 GO:0046983
Mibi01g3350 205 Gene3D - 20 101 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3350 Mibi-ChrMibi01 58808740 58809590 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3350 33 193 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 38.690 1.60e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi01g3350 HLH 7.4e-07 No_clan