Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3349 ATGATGAAGCCGCCGTTGCATCCACTAGTAGTTGGCGATGATGAAGATTTGTTCTTCCAAATTTCATTTCTCAATCGTAGTTCTCATCCTCTCTCAATTCAAACAATCCCAGAACATGAGATCTTTCATGATCCTCCCGAAGAACAAGTGAAGGATTACGAAAGACTTTCACCTAATTTTGGAGGTGAAGTAGTAATAGCAAAGGGAAGGGGCAAGCAGAAGCAGCAAAACGAACTTCCAGCTAAAATTGCAGAAGATGGCAACAAGAAATGGATGCATAGAGAGACAGAAAGACAAAGGAGACAAGAAATGGCGACTCTTTGTGCCTCCCTCAGATCTGCTTTGCCTCTCGAATATATCAGAGGGAAGCGATCAGCATCAGATCACATTGATGGGGCTGTGAAATATATCAAACAACTAAAGAACAAAGTGAAGCAATTGAAGGCAAAGAGAGATGAGATAATGAAAAGTGGACATAGAATCTCGGTTATTGTTCATCCTTACAAGGGTGGAGTTGAGATTATGTGCAGTTTTAGCTTCAGAGAGTACGCATTTGCTCAGTCAACGCTCTTGAGTATTTTGATTAAACAAGGGCTTAACTTGTTGAGCTACACTTCAATCAAAAGGGATGAGATGTCTATTCTCACAATTCAATTAGAGGAGTCTGATGTCTCTGAGAGTACTACTGACTACTCTGAACTTCAAAGAAAACTTACCGAAGCAATATTATGCACAAAACATAGAGAGAGTACTGCATGCGAAGAAAGCCCCTGA 774 0.4057 MMKPPLHPLVVGDDEDLFFQISFLNRSSHPLSIQTIPEHEIFHDPPEEQVKDYERLSPNFGGEVVIAKGRGKQKQQNELPAKIAEDGNKKWMHRETERQRRQEMATLCASLRSALPLEYIRGKRSASDHIDGAVKYIKQLKNKVKQLKAKRDEIMKSGHRISVIVHPYKGGVEIMCSFSFREYAFAQSTLLSILIKQGLNLLSYTSIKRDEMSILTIQLEESDVSESTTDYSELQRKLTEAILCTKHRESTACEESP 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3349 257 Coils Coil 130 157 - -
Mibi01g3349 257 SMART finulus 94 146 IPR011598 GO:0046983
Mibi01g3349 257 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 87 167 IPR036638 GO:0046983
Mibi01g3349 257 Gene3D - 80 166 IPR036638 GO:0046983
Mibi01g3349 257 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 84 240 IPR015660 -
Mibi01g3349 257 Pfam Helix-loop-helix DNA-binding domain 90 141 IPR011598 GO:0046983
Mibi01g3349 257 FunFam Transcription factor bHLH126 81 166 - -
Mibi01g3349 257 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 88 140 IPR011598 GO:0046983
Mibi01g3349 257 CDD bHLH_AtORG2_like 89 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3349 Mibi-ChrMibi01 58801234 58802711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3349 72 220 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51790 38.462 3.23e-28 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi01g3349 HLH 1.4e-08 No_clan