Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3339 ATGGATGTTTCTAAGGGCAACAGTGGTTCTGAACCTTCAACTTCTTACAGCTGTTTCAAAGTAGCAAGCCTAAGTGAAACTATTCTGGACACAAAGCAGTCTGCAAATTTGAAAGATCGTTACATTCTTGGCGAGCAGTTAGGTTGGGGGCAGTTTGGTGTTATCAGGGCTTGCACAGACAAGTTGACTGGAGATGTTTTAGCCTGTAAGTCAATTGCTAAAGATAGATTGGTCACATCGGATGATCTGAGGAGTGTCAAACTTGAGATTGAGATAATGGCTAGGTTATCTGGCCATCCAAATGTTGTAGATCTCAAGGCAGTTTATGAAGAGGAGGGTTTTGTGCACCTGGTGATGGAGCTTTGTGCTGGGGGTGAACTATTTCACCGGCTAGAGAAGAATGGGCGATTTTCGGAATCTGAAGCCCAGGTTCTCTTTAGGCACCTCATGAAGGTGGTTTTGTATTGTCATGAGAATGGGGTTGTTCATAGAGATTTGAAGCCTGAGAACATTCTCTTGGCAACAAGAGCCTCTTCATCTCCAATTAAATTGGCAGATTTTGGGCTTGCAACTTACATTAAGCCTGGACAAAGTTTGCATGGGTTAGTTGGGAGTCCATTCTATATAGCTCCAGAGGTGCTTGCAGGTTCATATAACCAGGCTGCTGATGTTTGGAGTGCAGGTGTCATTCTTTACATTTTACTTAGTGGGATGCCTCCGTTTTGGGGTAAGACCAAGTCGCGGATCTTTGAAGCCGTTAAGGCTGCTGACTTGAGGTTCCCATCTGAACCTTGGGATCACATTTCTAAGTCAGCGAAGGATTTGATCAAGGGAATGCTTTGCACAGAACCCACTCGAAGGCTCACTGCTCAGCAGGTCTTAGATCATTGCTGGATGGAGAGCAATCAATCAAATCCTGAACAACTAATTGAATGTGACATCAAAAGTTGTGGTGAATGGGATGTTGGTGATAGCTCATTCTCTGTGTCCTTTATGCCCAGGAATCAGGACATCAGCTTCGGTGCCGAATCTCCTGCGTGTGATGCTCTGTCACCAACTTTCACTTGCAGATCGTCGTTTTCTTCATTTTTGGGGGAACCATTGACTCCTTGTTCGGCTTTGGGTGGATTTTCATTCAAGAGTGTCGGTGATTCTGCCTGCTTGGACTTCTCTTCTCCTGTTTCTTCCATGCCTAGCTTTGCATTTCTTAGCGCCAATTCTGTTATTGAGAAAAGGAGTTTTACATTAGAGTTCTCAACTAATGAATCCGTGAAGGCAATTGCTGAAGAAGCAAGCTTGGGAAAACTACTACTATCGCCAGATTCTGCTCTTTGTTGTGGACCGGATGTTAAAGCAAGTAATCGTAAGCCAGTGGAGACTAAAAGGGCAGGTAGTACCAATGGACATAGGGTTTTAGGAATCCACAGCAAGAGAAACCGAACAATTGGACTCGGCGAACGCGAGCAAATTGACATTGTGGTGACCGAATCTGTCATTCGATGGTCATCATGCACACAACTGCCAACATCTCTTAGGTCATCTCTTGTCTGTTGA 1554 0.4459 MDVSKGNSGSEPSTSYSCFKVASLSETILDTKQSANLKDRYILGEQLGWGQFGVIRACTDKLTGDVLACKSIAKDRLVTSDDLRSVKLEIEIMARLSGHPNVVDLKAVYEEEGFVHLVMELCAGGELFHRLEKNGRFSESEAQVLFRHLMKVVLYCHENGVVHRDLKPENILLATRASSSPIKLADFGLATYIKPGQSLHGLVGSPFYIAPEVLAGSYNQAADVWSAGVILYILLSGMPPFWGKTKSRIFEAVKAADLRFPSEPWDHISKSAKDLIKGMLCTEPTRRLTAQQVLDHCWMESNQSNPEQLIECDIKSCGEWDVGDSSFSVSFMPRNQDISFGAESPACDALSPTFTCRSSFSSFLGEPLTPCSALGGFSFKSVGDSACLDFSSPVSSMPSFAFLSANSVIEKRSFTLEFSTNESVKAIAEEASLGKLLLSPDSALCCGPDVKASNRKPVETKRAGSTNGHRVLGIHSKRNRTIGLGEREQIDIVVTESVIRWSSCTQLPTSLRSSLVC 517
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3339 517 FunFam Phosphoenolpyruvate carboxylase kinase 128 315 - -
Mibi01g3339 517 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Mibi01g3339 517 SMART serkin_6 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g3339 517 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
Mibi01g3339 517 CDD STKc_CAMK 40 298 - -
Mibi01g3339 517 ProSiteProfiles Protein kinase domain profile. 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g3339 517 PANTHER SERINE/THREONINE-PROTEIN KINASE 30 311 - -
Mibi01g3339 517 SUPERFAMILY Protein kinase-like (PK-like) 38 363 IPR011009 -
Mibi01g3339 517 Pfam Protein kinase domain 43 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g3339 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Mibi01g3339 517 FunFam Calcium-dependent protein kinase 1 43 126 - -
Mibi01g3339 517 Gene3D Transferase(Phosphotransferase) domain 1 128 319 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi01g3339 Mibi-ChrMibi01 58613263 58615706 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3339 24 306 EF-hand Containing Proteins AT3G57530 49.117 6.98e-99 303
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mibi01g3339 Pkinase 2.8e-71 CL0016