Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3335 ATGTTTTCATTCACGCATTCTTCATACCCTCATTCGCCGGCATCCGACAGTGGCGGCGGAGTACGGTCAATAATTATGTTGGACGAGGAGGTGTTATTGGCTTCGAGTCATCCGAAGAAAAGAGCAGGGAGGAAGAAATTCCGGGAGACTCGCCACCCTGTGTACCGGGGAGTTCGGCGGCGGAACTCCGGAAAGTGGGTGTGTGAAGTTCGTGAGCCCAATAAGAAAACGAGAATCTGGCTTGGGACGTTTCCGACGGCCGACATGGCGGCGAGGGCCAACGACGTGGCAGTGATCGCCCTCCGGGGCCGTTCAGCTTGTCTGAACTTCGCCGACTCGGCCTGGCGGCTGCCGGTGCCGGCGACCACCGGGGCAAAGGATATCCAGAGGGCGGCGGCAGAGGCCGCGGAGGCATTCCGTCCGGGGACAGAGTCGGAGGGGGACGAGTTGAGGCCGGAGAACACCGGGGAGGAGGCGGCGGTGGGGATGCCGGAGTGGCTGAGGGACATGGCGGAGACTGCGCTGATGTCACCCACTCATAGCATTGGGGATCAGTATGAGTATGAGTATGGTGACGTGGAAGTGGATGATGCTGAGGTGTCATTATGGAGTTATTCAATTTAA 624 0.5897 MFSFTHSSYPHSPASDSGGGVRSIIMLDEEVLLASSHPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTADMAARANDVAVIALRGRSACLNFADSAWRLPVPATTGAKDIQRAAAEAAEAFRPGTESEGDELRPENTGEEAAVGMPEWLRDMAETALMSPTHSIGDQYEYEYGDVEVDDAEVSLWSYSI 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3335 207 Gene3D AP2/ERF domain 54 112 IPR036955 GO:0003700|GO:0006355
Mibi01g3335 207 ProSiteProfiles AP2/ERF domain profile. 54 111 IPR001471 GO:0003700|GO:0006355
Mibi01g3335 207 PRINTS Ethylene responsive element binding protein signature 55 66 IPR001471 GO:0003700|GO:0006355
Mibi01g3335 207 PRINTS Ethylene responsive element binding protein signature 77 93 IPR001471 GO:0003700|GO:0006355
Mibi01g3335 207 FunFam Ethylene-responsive transcription factor 2 53 112 - -
Mibi01g3335 207 Pfam AP2 domain 53 103 IPR001471 GO:0003700|GO:0006355
Mibi01g3335 207 SUPERFAMILY DNA-binding domain 54 113 IPR016177 GO:0003677
Mibi01g3335 207 CDD AP2 55 113 IPR001471 GO:0003700|GO:0006355
Mibi01g3335 207 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 16 205 IPR045277 GO:0003700
Mibi01g3335 207 SMART rav1_2 54 117 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3335 Mibi-ChrMibi01 58587978 58588601 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3335 33 205 AP2-EREBP Transcription Factor Family AT4G25470 60.622 9.26e-69 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi01g3335 AP2 1.4e-12 CL0081