Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3327 ATGTTTTCATTCACGTATTCTTCTTACCCTCATTCGCCGGCATCAGATAGTGGCAGCGGCGGCGGAGGCGGAGTACGGTCATTGGCCATGTCGGACGAGGAGGTGTTATTGGCTTCGAGTCATCCGAAGAAAAGAGCAGGGCGGAAGAAATTCCGGGAGACTCGCCACCCTGTGTACCGGGGAGTTCGGCGGCGGAACTCCGGCAAGTGGGTATGTGAAGTGCGTGAGCCCAATAAGAAAACAAGGATTTGGCTTGGGACATTCCCGACGGCCGACATGGCGGCGAGGGCCCACGACGTGGCGGCGATCGCCCTCCGGGGCCGGTCCGCTTGCCTTAATTTCGCCGACTCGGCCTGGCGGCTGCCGGTGCCGGCAACGACTGAAGCCAAGGATATCCAGAGGGCGGCGGCGGAGGCCGCGGAGGCGTTCCGTCCAGGGACGGAGTCGGAGGGGGACGAGTTGAGGCCGGAGAACGCCGGGGAGGCGGAGGCGGCAGAGGAGATGCCGGAGTTGTTGAGGGACATGGCGGAGGCTGTGCTGATGTCACCTACTCATAGCATTGGGGATCAGTATGAAAGTGGTGAAGTGGAAGTGGATGATGCTGAGGTGTCATTATGGAGTTATTCAATTTAA 633 0.6003 MFSFTYSSYPHSPASDSGSGGGGGVRSLAMSDEEVLLASSHPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTADMAARAHDVAAIALRGRSACLNFADSAWRLPVPATTEAKDIQRAAAEAAEAFRPGTESEGDELRPENAGEAEAAEEMPELLRDMAEAVLMSPTHSIGDQYESGEVEVDDAEVSLWSYSI 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3327 210 ProSiteProfiles AP2/ERF domain profile. 58 115 IPR001471 GO:0003700|GO:0006355
Mibi01g3327 210 MobiDBLite consensus disorder prediction 145 167 - -
Mibi01g3327 210 MobiDBLite consensus disorder prediction 142 167 - -
Mibi01g3327 210 MobiDBLite consensus disorder prediction 1 27 - -
Mibi01g3327 210 SUPERFAMILY DNA-binding domain 58 117 IPR016177 GO:0003677
Mibi01g3327 210 MobiDBLite consensus disorder prediction 1 15 - -
Mibi01g3327 210 PRINTS Ethylene responsive element binding protein signature 81 97 IPR001471 GO:0003700|GO:0006355
Mibi01g3327 210 PRINTS Ethylene responsive element binding protein signature 59 70 IPR001471 GO:0003700|GO:0006355
Mibi01g3327 210 FunFam Ethylene-responsive transcription factor 2 57 116 - -
Mibi01g3327 210 Pfam AP2 domain 57 107 IPR001471 GO:0003700|GO:0006355
Mibi01g3327 210 SMART rav1_2 58 121 IPR001471 GO:0003700|GO:0006355
Mibi01g3327 210 Gene3D AP2/ERF domain 58 116 IPR036955 GO:0003700|GO:0006355
Mibi01g3327 210 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 26 208 IPR045277 GO:0003700
Mibi01g3327 210 CDD AP2 59 117 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3327 Mibi-ChrMibi01 58491430 58492062 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3327 37 208 AP2-EREBP Transcription Factor Family AT4G25470 61.257 5.55e-69 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi01g3327 AP2 8e-15 CL0081