Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3326 ATGGATAGTAGTAATAACCCTCCTCATCCTAAACCCGAACAGTCTTCCCCTTCTTCTTCTTCTCCTTCTCCTCCCGTTGTACAAGTTGCTCCTTCTTCTTCTAATGAGTCTTCGTTGTCTTCTCCGAGGACACTGAGATCGCCAGGGGGACAACATACGAGCCGGAGGCATGCAACTTTCCGGGGAATACGAAGCCGTAGCGGCAAATGGGTGTCGGAGATACGCGAGCCTCGGAAAACAACTCGCATTTGGCTCGGCACTTATCCGACTCCGGAGATGGCGGCCGCCGCCTATGACGTGGCGGCCCTCGCATTGAAAGGCCCCGACACTAACCTCAACTTCCCCAATTTGATCCTCTCCTACCCGATCCCTGCCTCATTGTCCGCCAACGACATCCGTGCCGCCGCCTCCGCCGCCGCCGAGTCCCGGCTTGTCCGGTCCCCCGGCGATCCCGGGGGAGGCGGACATGAGGCCGGGGTAGGTGGAGGTGGGGACCGCACCAGCGAAGCCACGACCAAGGAGGAGAAGAGTGAGGAGTTTATTGATGAGGATGAGTTGTTGAATATGCCTAGTTTGTTGGATGACATGGCAAGGGGAATGCAGGTGAGTCCTCCAAGGATGAAGTCTCCGTACGCTTCTGATGATTCTCCGCCCCATAATTCAGATCATGGAGATGGCCTCTGGAGTTTTTGA 693 0.5642 MDSSNNPPHPKPEQSSPSSSSPSPPVVQVAPSSSNESSLSSPRTLRSPGGQHTSRRHATFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGPDTNLNFPNLILSYPIPASLSANDIRAAASAAAESRLVRSPGDPGGGGHEAGVGGGGDRTSEATTKEEKSEEFIDEDELLNMPSLLDDMARGMQVSPPRMKSPYASDDSPPHNSDHGDGLWSF 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3326 230 CDD AP2 60 117 IPR001471 GO:0003700|GO:0006355
Mibi01g3326 230 FunFam Ethylene-responsive transcription factor 2 58 116 - -
Mibi01g3326 230 Pfam AP2 domain 61 107 IPR001471 GO:0003700|GO:0006355
Mibi01g3326 230 Gene3D AP2/ERF domain 59 116 IPR036955 GO:0003700|GO:0006355
Mibi01g3326 230 SUPERFAMILY DNA-binding domain 60 116 IPR016177 GO:0003677
Mibi01g3326 230 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 28 200 - -
Mibi01g3326 230 MobiDBLite consensus disorder prediction 20 54 - -
Mibi01g3326 230 MobiDBLite consensus disorder prediction 1 57 - -
Mibi01g3326 230 ProSiteProfiles AP2/ERF domain profile. 59 115 IPR001471 GO:0003700|GO:0006355
Mibi01g3326 230 MobiDBLite consensus disorder prediction 143 230 - -
Mibi01g3326 230 SMART rav1_2 59 121 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3326 Mibi-ChrMibi01 58461455 58462147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3326 54 230 AP2-EREBP Transcription Factor Family AT5G52020 59.116 7.13e-54 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi01g3326 AP2 2.9e-10 CL0081