Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3324 ATGCGGACCTCTTCCTCATTATTCGGCCAATATTTACGTAATTGTAATAATAGAATTTTCTTTGAAACTCCAGTTGCAACTGCTGCGAGTGGTCATGAAGCTTTGAAAACCCTTAAAGAATTCAGAGGCTTCTTTGACCTCGTCATCGCAGACATGAATATGCGAGGAATGAATGGACTTGAACTCCAGAAGCATGTCAAATGCGAGTTCAATCTTCCAGTCATCATTATGTCAACAGATAGGAGGAAGAGTGTGATGCGGAGGAGTTTAGATCATGGAGCAGCATATTGCATAGCAAAACCAATACAAAGAGAAGACTTGAAAGATGTGTGGCAATATGCTGTGGCTGGTGGGAGACAAAAACTAAGAGTTCAGAATGACAAAGTAGTATCAGTGAGCGAAGAAGAAGAAGAAGGAGACTTATCATCAGCAACAGCCAATAATAGGAATGTAGCCTCTTGTAGTCAAGATTTAGCGTTGCTTAAAAATCAAAGGAAGAAGTATTGCAAGAGAAAACGAAGTGAGGTGGTTGAGAATGAAGAACTCATATTCTGTGGTCCAAAGAGGTCCAAGATTTTTTGGACTACTGATCTTCACAATCGCTTTTTGTTAGCCATAAACCACATTGGCATGGACAACAAAGGAATCATCGAGGGATTATCTGAGAGAGCCTTAAGGTCAAGCTATAACAATCTTGGGATGGTAACTCCTTATAGAGGCTCTGGCTTGCAACGAAGTCCAAGTGCATATAACTATAATAACCACCATGCAACTCTACTGGACAACAATAATAACCGTGGGATGATGGTGCCTTTTTATGGAAGCTCTGGTTTGCACCAAAGTACTGCTAGTACTTATAACAACCACCATGGAACTCAATTGAACAACAATGCTTCTCTTATCCTTGATGCGCCGAATCGAATTCAGAATGTTGATTATAGCAACAACTACAACAGAAGCAGCAGCAGTATATTTGGCTTGTTAAGTAATGGGAGTGCTTCAAATAATGCACTTGTGCCTGCTTCGTCCTCAGGTGTGAATGTTTGTGTTGAAGAACCAAATCCAGCAAATATATATGTAGGGCTTCCATCTATGTCTCAGAAGTCTGTTAATAATGGTGTTAGGATTAATGCTGGAGGTGGTAATCATGATCAGAATAATACTATCACTTCAGTGAATCAGCGAGATGAAGCTGGCCAAATGGATGATTTCAATGAACTTTTCCTAATGCTAAACGATATGGTTCTTCCTGATGAGGTTGTCTCAAATCAGACTACAGAGAGCCCTCACGCTGATGAACGTTCGAGTTCTGACATTCTTAGCTCCTTCAATGCGGAAGACTACATTGAGCTTGTGATGGGGAACGATGTGTACACAAATTTGGAACCCTTGGACATGTTCATGGCTGATTCATCAACGGGAAACACAAAGCAGGCTAGCCATCTTATAAAAGTTTTAGGAGGCGTCGGCGCCTCGAGTTCTAAGACGACTATTCTTGGGCAAGATCACTGCTTCACGTTAAAGCCGATTTCTGAGCTTCTCGGCATGGATGCTTCTGCCATGGCTGTCGATGAGGTTTCTGAGGCAGAAGTCGCGTGTCGATGTGCAGCTTGCAGGAATCAAAGAAGAAAATGTCCTCCTGATTGCATTTTCTCTCCTTATTTTCCTGCCAACGATCCTCAAAGATTCACTTATGTCCACCAAATATATGGTGGTAACAGGGTTGGAAGAATTCTTCAGGAAATTCCATCATATGTGAGAGCAGAAGCAGCAGATGCAATGTATTTCGAAGCACAATGTAGGATTGAAGATCCAGTATATGGCTGCGTGAGGATTATTTCGGAGTTATGCCAACAAATCAACAACATAGAAATTGAATTAGCCAGAGTTCAAGCTCTTATTGCTTTCCAGAAGTTTCACATCCCAGAAAATGGAGTTCACGAACCCAACTTGGATGTTAATTATTATGCCATTACAGAGCAGCAAAGGCCACTTTCAGATTAA 2004 0.4137 MRTSSSLFGQYLRNCNNRIFFETPVATAASGHEALKTLKEFRGFFDLVIADMNMRGMNGLELQKHVKCEFNLPVIIMSTDRRKSVMRRSLDHGAAYCIAKPIQREDLKDVWQYAVAGGRQKLRVQNDKVVSVSEEEEEGDLSSATANNRNVASCSQDLALLKNQRKKYCKRKRSEVVENEELIFCGPKRSKIFWTTDLHNRFLLAINHIGMDNKGIIEGLSERALRSSYNNLGMVTPYRGSGLQRSPSAYNYNNHHATLLDNNNNRGMMVPFYGSSGLHQSTASTYNNHHGTQLNNNASLILDAPNRIQNVDYSNNYNRSSSSIFGLLSNGSASNNALVPASSSGVNVCVEEPNPANIYVGLPSMSQKSVNNGVRINAGGGNHDQNNTITSVNQRDEAGQMDDFNELFLMLNDMVLPDEVVSNQTTESPHADERSSSDILSSFNAEDYIELVMGNDVYTNLEPLDMFMADSSTGNTKQASHLIKVLGGVGASSSKTTILGQDHCFTLKPISELLGMDASAMAVDEVSEAEVACRCAACRNQRRKCPPDCIFSPYFPANDPQRFTYVHQIYGGNRVGRILQEIPSYVRAEAADAMYFEAQCRIEDPVYGCVRIISELCQQINNIEIELARVQALIAFQKFHIPENGVHEPNLDVNYYAITEQQRPLSD 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3324 667 ProSiteProfiles LOB domain profile. 533 634 IPR004883 -
Mibi01g3324 667 Pfam Response regulator receiver domain 25 109 IPR001789 GO:0000160
Mibi01g3324 667 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 534 639 - -
Mibi01g3324 667 Coils Coil 613 633 - -
Mibi01g3324 667 Gene3D - 6 185 - -
Mibi01g3324 667 Pfam Lateral organ boundaries (LOB) domain 534 631 IPR004883 -
Mibi01g3324 667 SMART REC_2 4 111 IPR001789 GO:0000160
Mibi01g3324 667 ProSiteProfiles Response regulatory domain profile. 1 115 IPR001789 GO:0000160
Mibi01g3324 667 SUPERFAMILY CheY-like 25 121 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3324 Mibi-ChrMibi01 58420127 58430441 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3324 534 648 AS2 family AT3G26620 51.304 2.93e-39 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mibi01g3324 LOB 2e-32 No_clan