Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mibi01g3323 | ATGAGGTCTATCTTCTGTGGAAACTTGGAACATGATACTCGGCAGTCTGATCTGGAGCGGATGTTTAAAAGATATGGGAAGGTGGATAGGGTGGAAATGAAGTCCGGGTTTGCCTTCATCTATATGGAAGATGAGAGAGATGCTGAGGATGCAATTCGTGCACTTGATAGGGTAGAATTTGGTCGACAGGGACGCAGACTCCGTGTGGAATGGACAAAACATGAACGTGACAATAGAAGGCCTGGTAGTTCAAGAAGATCTTCAGCAAATTCAAGGCCATCAAAGACTTTATTTGTTATTAATTTTGATACATATCAAACCAGGACTAGGGATTTGGAGAGGCACTTTGAGCCATATGGAAAGATAGTTAATGTGAGGATTAGAAGGAATTTCGCATTTGTCCAGTATGAGTCATTAGATGATGCCATCAGAGCATTGGAAGCTACAAATATGAGCAAGTTACTCGATCGAGTTATTACAGTAGAATTTGCTGCAGACTATGATGATGACAGGAGGAATGCACGTAGTCCTGATAGAAGTCATGTTCGTTCACGCGATACGGGCTACGATAGAAAGCGATCACACAGTCCATATCGCCGGGAGAGAGACAGCCCTGATTATGGAAGGGGGGGCTCTAACTCATATAGGAAAGAGAGGAGCAGCCCTGATTATGGCCATGACCGCGGTCAGAGTTCCCAACAATTTGAGAGTGGTGGCCGTGATTATAGTGACAGGAGACGTAGTCCATATAGAAGAGAGAGGGATGGTTCTGACCCTGTTCATGGCTCTAGCCATAGTCCTGACCATGAAGAACAAGCTGCAACTGACTGTGGCAATTCTCAATCCCATAGTCCTGAAGGAAGAGAGAGAGTAAGTCCTCGAGATGGTGGTTCGGGCCAAAGCCCTTCACATATGAAGAGAGCTAGCTCTGAAAATGGTCATGGCTCAATGAGCAGTCCTGATGCAAGAGGTGATTCCAGTCCTTACAATGGTGATGAAGATCACATAAATTTTGCGCCTGAGCCGAAGGACGATGCTGACCATGATGCGCCTGAAAGTCCCATGGATGAAACATACCGCAGCCAATCTCCTGCTGCTGAAGAATGA | 1107 | 0.458 | MRSIFCGNLEHDTRQSDLERMFKRYGKVDRVEMKSGFAFIYMEDERDAEDAIRALDRVEFGRQGRRLRVEWTKHERDNRRPGSSRRSSANSRPSKTLFVINFDTYQTRTRDLERHFEPYGKIVNVRIRRNFAFVQYESLDDAIRALEATNMSKLLDRVITVEFAADYDDDRRNARSPDRSHVRSRDTGYDRKRSHSPYRRERDSPDYGRGGSNSYRKERSSPDYGHDRGQSSQQFESGGRDYSDRRRSPYRRERDGSDPVHGSSHSPDHEEQAATDCGNSQSHSPEGRERVSPRDGGSGQSPSHMKRASSENGHGSMSSPDARGDSSPYNGDEDHINFAPEPKDDADHDAPESPMDETYRSQSPAAEE | 368 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mibi01g3323 | 368 | Gene3D | - | 87 | 180 | IPR012677 | - | |
Mibi01g3323 | 368 | Gene3D | - | 1 | 86 | IPR012677 | - | |
Mibi01g3323 | 368 | FunFam | Serine/arginine-rich splicing factor RS31 | 1 | 85 | - | - | |
Mibi01g3323 | 368 | MobiDBLite | consensus disorder prediction | 170 | 207 | - | - | |
Mibi01g3323 | 368 | MobiDBLite | consensus disorder prediction | 239 | 272 | - | - | |
Mibi01g3323 | 368 | MobiDBLite | consensus disorder prediction | 296 | 325 | - | - | |
Mibi01g3323 | 368 | SMART | rrm1_1 | 3 | 70 | IPR000504 | GO:0003723 | |
Mibi01g3323 | 368 | SMART | rrm1_1 | 96 | 162 | IPR000504 | GO:0003723 | |
Mibi01g3323 | 368 | MobiDBLite | consensus disorder prediction | 170 | 368 | - | - | |
Mibi01g3323 | 368 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 2 | 74 | IPR000504 | GO:0003723 | |
Mibi01g3323 | 368 | MobiDBLite | consensus disorder prediction | 336 | 355 | - | - | |
Mibi01g3323 | 368 | MobiDBLite | consensus disorder prediction | 72 | 92 | - | - | |
Mibi01g3323 | 368 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 97 | 159 | IPR000504 | GO:0003723 | |
Mibi01g3323 | 368 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 4 | 61 | IPR000504 | GO:0003723 | |
Mibi01g3323 | 368 | SUPERFAMILY | RNA-binding domain, RBD | 2 | 91 | IPR035979 | GO:0003676 | |
Mibi01g3323 | 368 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 95 | 166 | IPR000504 | GO:0003723 | |
Mibi01g3323 | 368 | SUPERFAMILY | RNA-binding domain, RBD | 81 | 172 | IPR035979 | GO:0003676 | |
Mibi01g3323 | 368 | PANTHER | SERINE/ARGININE RICH SPLICING FACTOR | 96 | 298 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mibi01g3323 | Mibi-ChrMibi01 | 58415233 | 58418087 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mibi01g3323 | 3 | 161 | Eukaryotic Initiation Factors Gene Family | AT4G34110 | 25.287 | 9.26e-07 | 48.9 |