Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3323 ATGAGGTCTATCTTCTGTGGAAACTTGGAACATGATACTCGGCAGTCTGATCTGGAGCGGATGTTTAAAAGATATGGGAAGGTGGATAGGGTGGAAATGAAGTCCGGGTTTGCCTTCATCTATATGGAAGATGAGAGAGATGCTGAGGATGCAATTCGTGCACTTGATAGGGTAGAATTTGGTCGACAGGGACGCAGACTCCGTGTGGAATGGACAAAACATGAACGTGACAATAGAAGGCCTGGTAGTTCAAGAAGATCTTCAGCAAATTCAAGGCCATCAAAGACTTTATTTGTTATTAATTTTGATACATATCAAACCAGGACTAGGGATTTGGAGAGGCACTTTGAGCCATATGGAAAGATAGTTAATGTGAGGATTAGAAGGAATTTCGCATTTGTCCAGTATGAGTCATTAGATGATGCCATCAGAGCATTGGAAGCTACAAATATGAGCAAGTTACTCGATCGAGTTATTACAGTAGAATTTGCTGCAGACTATGATGATGACAGGAGGAATGCACGTAGTCCTGATAGAAGTCATGTTCGTTCACGCGATACGGGCTACGATAGAAAGCGATCACACAGTCCATATCGCCGGGAGAGAGACAGCCCTGATTATGGAAGGGGGGGCTCTAACTCATATAGGAAAGAGAGGAGCAGCCCTGATTATGGCCATGACCGCGGTCAGAGTTCCCAACAATTTGAGAGTGGTGGCCGTGATTATAGTGACAGGAGACGTAGTCCATATAGAAGAGAGAGGGATGGTTCTGACCCTGTTCATGGCTCTAGCCATAGTCCTGACCATGAAGAACAAGCTGCAACTGACTGTGGCAATTCTCAATCCCATAGTCCTGAAGGAAGAGAGAGAGTAAGTCCTCGAGATGGTGGTTCGGGCCAAAGCCCTTCACATATGAAGAGAGCTAGCTCTGAAAATGGTCATGGCTCAATGAGCAGTCCTGATGCAAGAGGTGATTCCAGTCCTTACAATGGTGATGAAGATCACATAAATTTTGCGCCTGAGCCGAAGGACGATGCTGACCATGATGCGCCTGAAAGTCCCATGGATGAAACATACCGCAGCCAATCTCCTGCTGCTGAAGAATGA 1107 0.458 MRSIFCGNLEHDTRQSDLERMFKRYGKVDRVEMKSGFAFIYMEDERDAEDAIRALDRVEFGRQGRRLRVEWTKHERDNRRPGSSRRSSANSRPSKTLFVINFDTYQTRTRDLERHFEPYGKIVNVRIRRNFAFVQYESLDDAIRALEATNMSKLLDRVITVEFAADYDDDRRNARSPDRSHVRSRDTGYDRKRSHSPYRRERDSPDYGRGGSNSYRKERSSPDYGHDRGQSSQQFESGGRDYSDRRRSPYRRERDGSDPVHGSSHSPDHEEQAATDCGNSQSHSPEGRERVSPRDGGSGQSPSHMKRASSENGHGSMSSPDARGDSSPYNGDEDHINFAPEPKDDADHDAPESPMDETYRSQSPAAEE 368
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3323 368 Gene3D - 87 180 IPR012677 -
Mibi01g3323 368 Gene3D - 1 86 IPR012677 -
Mibi01g3323 368 FunFam Serine/arginine-rich splicing factor RS31 1 85 - -
Mibi01g3323 368 MobiDBLite consensus disorder prediction 170 207 - -
Mibi01g3323 368 MobiDBLite consensus disorder prediction 239 272 - -
Mibi01g3323 368 MobiDBLite consensus disorder prediction 296 325 - -
Mibi01g3323 368 SMART rrm1_1 3 70 IPR000504 GO:0003723
Mibi01g3323 368 SMART rrm1_1 96 162 IPR000504 GO:0003723
Mibi01g3323 368 MobiDBLite consensus disorder prediction 170 368 - -
Mibi01g3323 368 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 2 74 IPR000504 GO:0003723
Mibi01g3323 368 MobiDBLite consensus disorder prediction 336 355 - -
Mibi01g3323 368 MobiDBLite consensus disorder prediction 72 92 - -
Mibi01g3323 368 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 97 159 IPR000504 GO:0003723
Mibi01g3323 368 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 4 61 IPR000504 GO:0003723
Mibi01g3323 368 SUPERFAMILY RNA-binding domain, RBD 2 91 IPR035979 GO:0003676
Mibi01g3323 368 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 95 166 IPR000504 GO:0003723
Mibi01g3323 368 SUPERFAMILY RNA-binding domain, RBD 81 172 IPR035979 GO:0003676
Mibi01g3323 368 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 96 298 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi01g3323 Mibi-ChrMibi01 58415233 58418087 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3323 3 161 Eukaryotic Initiation Factors Gene Family AT4G34110 25.287 9.26e-07 48.9