Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3313 ATGGGCTTTCTCCGGCGAATTTTCGGCGGCAAGAAGCCGGCGTCTCACAAGTCCGGCTCTGAACCTGTAAAGACTAAACGGAGATGGAGTTTCATCAAAAACGGCAAAGAAAAGTCTCAAAGTGCTACTTCTGATCTCAAACACACCGACCTTTCAGCATCTCCGCTTCCGTACGGTGATTCCTTGGACGCTAATAAACATGCTATTGCGGTCGCCGCGGCGACGGCCGCCGTCGCGGAGGCCGCTCTCGCCGCCGCTCATGCCGCGGCCGAGGTAGTTAGACTCACAAACGGTGGTTGCGGTCCTGCTACTAGCCAACACCGGTGGCCGGAAGAGATCGCCGCCGTTAAGATACAATCGGCGTTTCGTGGTTACTTGGCAAAGAGAGCTCTGAGAGCACTAAAGGCATTGGTGAAGTTGCAAGCATTGGTGAGAGGTCATATTGTAAGAAAGCAAACATCAGATATGCTGAGGCGCATGCAAACTTTGGTGAGGCTGCAGTCTCGTGCACGTGCAGGTCGCGTGCATCTGTCTCATATTCTCCATTCTCCCAACAAGTCTCCACTCTCTCTTCACCCTGTCTCTGAACACCATGAATCCTCACTTAGAACCAACAGTAAATTTGAAGGATCTCCTCTCCTCAAGAGGTGCAGTTCCAATGCAAATTTTAGGGAAATTGGCTCGGGGAGATCAAGGTTTGGATCGCAATGGTATGACCAATGGATGGAAGAGAATGTTTGGAACCATCCCAGAGGAGATGATGAGAAGAGTGACAAGATTCTGGAAGTTGACACATGGAAGCCAAATTTGAACTCCAAAAACGAAAATCGTTTGGCATATGAGTCTCCTTCGAAGCGCTCAACAAGAAGTGTGAACCAAAGCTTCTTCAGTTCCCTCAAGTTTCAAAGGAGAAAAGAAGAGAAACCTTCAAGAGCAGGGGAGACCATCATCAAAGAACTCTCAGCCTCCTATTCATATCAGAACAGTCCAGAGTCATTCTCTGCTTCAAGAAGAAGAACAGGTCCTTTCACACCCACAAGAAGTGAGTGTGGCTACTTTGGTCACCCAAACTATATGGCCAACACTGAGTCATCTCGAGCCAAGGCTAGATCAGTGAGTGCCCCAAGGCAAAGACTTTGGGATTTTGGGAATAATTCAGATAGGCATGCTGATCTCAGAAGCCAATTCACATCTTCAACTTCAAGCCGCTTCAACAAAGTCCTCAGTGCCCGTCTAAGGTGA 1242 0.4879 MGFLRRIFGGKKPASHKSGSEPVKTKRRWSFIKNGKEKSQSATSDLKHTDLSASPLPYGDSLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTNGGCGPATSQHRWPEEIAAVKIQSAFRGYLAKRALRALKALVKLQALVRGHIVRKQTSDMLRRMQTLVRLQSRARAGRVHLSHILHSPNKSPLSLHPVSEHHESSLRTNSKFEGSPLLKRCSSNANFREIGSGRSRFGSQWYDQWMEENVWNHPRGDDEKSDKILEVDTWKPNLNSKNENRLAYESPSKRSTRSVNQSFFSSLKFQRRKEEKPSRAGETIIKELSASYSYQNSPESFSASRRRTGPFTPTRSECGYFGHPNYMANTESSRAKARSVSAPRQRLWDFGNNSDRHADLRSQFTSSTSSRFNKVLSARLR 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3313 413 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 156 IPR027417 -
Mibi01g3313 413 SMART iq_5 110 132 IPR000048 GO:0005515
Mibi01g3313 413 SMART iq_5 133 154 IPR000048 GO:0005515
Mibi01g3313 413 MobiDBLite consensus disorder prediction 17 44 - -
Mibi01g3313 413 MobiDBLite consensus disorder prediction 328 348 - -
Mibi01g3313 413 MobiDBLite consensus disorder prediction 328 343 - -
Mibi01g3313 413 PANTHER IQ-DOMAIN 5-RELATED 24 397 - -
Mibi01g3313 413 Pfam Protein of unknown function (DUF4005) 327 397 IPR025064 -
Mibi01g3313 413 ProSiteProfiles IQ motif profile. 111 139 IPR000048 GO:0005515
Mibi01g3313 413 Pfam IQ calmodulin-binding motif 114 132 IPR000048 GO:0005515
Mibi01g3313 413 Pfam IQ calmodulin-binding motif 135 152 IPR000048 GO:0005515
Mibi01g3313 413 Gene3D - 111 162 - -
Mibi01g3313 413 ProSiteProfiles IQ motif profile. 135 162 IPR000048 GO:0005515
Mibi01g3313 413 MobiDBLite consensus disorder prediction 1 48 - -
Mibi01g3313 413 MobiDBLite consensus disorder prediction 186 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3313 Mibi-ChrMibi01 58232967 58235425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3313 1 400 IQD Protein Family AT5G07240 45.455 5.39e-62 205