Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3311 ATGTCTCTTTCTCTTCCACAGATCCCAGGGAGAGAGAAAGCGAAGGATCTGAAAAGTTCACAACTCTCTTGGCTGTTCTTTGCAACCAAACCAACCAACAAGACTGTAGTTTTTGTTTTCGCCCTTTTACTTTTCCTCACTGTCCAATTTATAAAGAGAAGGAGAATGAATCATCGTAATAATGTGGAGATGGGTCTTCTGGGGGAAGGCTTCGATTCGAGTTTGATGGGGAGGATTAGGGATAACGATGGGTATGAGAGTCGTTCAGGGAGTGATAATTTCGATGGAGTATCTGGTGAAGATGATCAGGAAGCTGCTGATGATAATACTCCTAATCGCAGCAGATCCAACAAGAAGTACCATAGGCACACTCCTCACCAAATTCAAGAGCTTGAAACTTTCTTTAAGGACTGTCCTCATCCTGATGAGAAGCAAAGGCTGGAACTTAGTAGGAGGCTTGGCTTGGAGACTAAGCAAGTCAAATTCTGGTTTCAAAATCGCCGAACCCAAATGAAGACGCAGCTGGAGAGGCATGAGAATCTGATGCTGAGGCAAGAAAACGACAAGCTGAGAGCAGAGAACGGCATGATGAAGGAAGGAATGGCCAACCCAATATGCAACAACTGTGGAAGCCAAGCCATTCCTGGTCAAATCTCATTCGAAGAACACCAACTTCGCATCGAAAATGCTCGCTTAAAAGACGAACTCAATCGCATTTGTGCCTTGGCCAGCAAGTTTATAGGAAGGCCAATCTCAACCATGGCTCTCCCAACCTCAATGAACTCAGCTGCTCTTGATCTAGCCATTGGAAGAAACTACAATATTAATAATAATAATATTCCTATCCCTCCTGGTTTTGGTGGACCAAGCTTTATTCCGATGGGACTTGATATGGGGATGATGATGCCTCATCAGATGGCAAATAATAATAACAATGATCAAACAATACAAGCTGAGAGATCCATGCTTATAGACCTTGCTTTGTCTTCCATGGAGGAATTGATGAAGATGGCTCAAGGAGATGCTCCTCTTTGGACTAAGACATTGGATGGCGAAAATGAAGTGTTGAATCTTGAGGAGTATGGTAGGATTGTTCCTCCTTGCCTTGGCCCTAAACCTGATGGTTATGTCACTGAAGCTACTAGACACACTGGAATTGTTATGATCAATAGTTTGGCTCTCATCGAGACATTGATGGACGTGAATCGATGGGGGGAGATGTTTGGAAGCATGATTGCTAGAGCTGTGCCTCTTGATGTGATAGCAAGTGGCATGGGAGGGACTAGAAGCGGTACTTTGCTCGTGTTGGAGGCTGAGTTGCAAATGATGTCGCCACTGGTGCCAGTACGGCAAACGAGGATGCTGAGATTATGCAAGCAGCAAACAGAAAACCAATGGGCTGTGGTTGATGTTTCAGTTGATATTGGTCGTGAACCCACCAATGCGCACCCTTTCGTCAGATGTAGGAGGCTTCCTTCTGGCTGCCTCATCCAAGATATGCCCAACGGTTACTCCAAGGTGACATGGGTGGAGCATTGGGAGTACGATGAAAATGTGGTGCACCAAGTTTACCGTCCGATGGTGAACGCCGGCATCGGCTTTGGCGCTCACCGGTGGATCTCCACCCTCCAAAGGCAATGCGAATGCTTGGCCATCCTCCTCTCCTCCTCCATCTCTACCGATGACCACACAACACTGAGCCAAGGTGGTCGGAGAAGCATGGTGAAGCTGGCACAACGTATGACTGAGAACTTCTGTTCCGGCATAGTGGCTTCCTCCTGTCGGCGGTGGGAGAGGCTTCATGTGGACAGTCTAGGAGACGATGTGAAGATCATGACACGTAATAATAATGAAGGCGGTGAGGCCGGCGATCCCCCCGGCATCATGCTCAGCGCCTCCACCTCCTTCTGGCTGCCCGTGTCACGGCAGAGGTTGTTTGACTTCCTCCGTGACGACCGCCGGAGATTGGAGTGGGACATCTTGTCCAGTGGTGCCGGGACCATGCAGGAAGTTGCCGTCATTGCCAAAGGACAGACTAATGGTAACTGTGTCTCTCTTCTTCGTAGCAATGTTGTGAATGGGAACGAGACGGGAATGGTGATACTACAAGACACATGGACAGATGCTACAGGATCAATGGTGGTTTATGCATCGGTTGATTTGCAGTCACTGAACGTTGTGATGAGTGGTGGTGATTCTTCTTACGTGGCCCTCTTGCCCTCCGGCTTTGCCATTCATTCCGACGGTCCCAACGCCTCCCGCGACGGCAGTCCAAAGGGCGGAGGGAGCCTCCTTACGGTGGGGCTGCAGATACTGGTGAACACATTGCCAACAGGGAAGCTGACAGTTGAGTCTGTTGAAACAGTTAATAATGTCATGATGACCACAGTTGACAAGATCAAAGAAGCAGTCACGGTTGGATGA 2424 0.4831 MSLSLPQIPGREKAKDLKSSQLSWLFFATKPTNKTVVFVFALLLFLTVQFIKRRRMNHRNNVEMGLLGEGFDSSLMGRIRDNDGYESRSGSDNFDGVSGEDDQEAADDNTPNRSRSNKKYHRHTPHQIQELETFFKDCPHPDEKQRLELSRRLGLETKQVKFWFQNRRTQMKTQLERHENLMLRQENDKLRAENGMMKEGMANPICNNCGSQAIPGQISFEEHQLRIENARLKDELNRICALASKFIGRPISTMALPTSMNSAALDLAIGRNYNINNNNIPIPPGFGGPSFIPMGLDMGMMMPHQMANNNNNDQTIQAERSMLIDLALSSMEELMKMAQGDAPLWTKTLDGENEVLNLEEYGRIVPPCLGPKPDGYVTEATRHTGIVMINSLALIETLMDVNRWGEMFGSMIARAVPLDVIASGMGGTRSGTLLVLEAELQMMSPLVPVRQTRMLRLCKQQTENQWAVVDVSVDIGREPTNAHPFVRCRRLPSGCLIQDMPNGYSKVTWVEHWEYDENVVHQVYRPMVNAGIGFGAHRWISTLQRQCECLAILLSSSISTDDHTTLSQGGRRSMVKLAQRMTENFCSGIVASSCRRWERLHVDSLGDDVKIMTRNNNEGGEAGDPPGIMLSASTSFWLPVSRQRLFDFLRDDRRRLEWDILSSGAGTMQEVAVIAKGQTNGNCVSLLRSNVVNGNETGMVILQDTWTDATGSMVVYASVDLQSLNVVMSGGDSSYVALLPSGFAIHSDGPNASRDGSPKGGGSLLTVGLQILVNTLPTGKLTVESVETVNNVMMTTVDKIKEAVTVG 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3311 807 MobiDBLite consensus disorder prediction 82 124 - -
Mibi01g3311 807 SMART HOX_1 116 178 IPR001356 GO:0003677
Mibi01g3311 807 SUPERFAMILY Bet v1-like 570 777 - -
Mibi01g3311 807 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 116 804 IPR042160 -
Mibi01g3311 807 SUPERFAMILY Homeodomain-like 107 174 IPR009057 -
Mibi01g3311 807 SUPERFAMILY Bet v1-like 318 549 - -
Mibi01g3311 807 FunFam Homeobox-leucine zipper protein HDG1 100 190 - -
Mibi01g3311 807 Gene3D - 372 548 IPR023393 -
Mibi01g3311 807 ProSiteProfiles START domain profile. 316 552 IPR002913 GO:0008289
Mibi01g3311 807 ProSitePatterns 'Homeobox' domain signature. 149 172 IPR017970 GO:0000981|GO:0006355
Mibi01g3311 807 SMART START_1 325 549 IPR002913 GO:0008289
Mibi01g3311 807 CDD START_ArGLABRA2_like 320 548 - -
Mibi01g3311 807 CDD homeodomain 118 174 IPR001356 GO:0003677
Mibi01g3311 807 Pfam Homeodomain 118 172 IPR001356 GO:0003677
Mibi01g3311 807 Coils Coil 168 188 - -
Mibi01g3311 807 ProSiteProfiles 'Homeobox' domain profile. 114 174 IPR001356 GO:0003677
Mibi01g3311 807 Pfam START domain 326 549 IPR002913 GO:0008289
Mibi01g3311 807 Gene3D - 102 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3311 Mibi-ChrMibi01 58205204 58211385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3311 59 804 Homeobox Transcription Factor Family AT3G61150 53.064 0.0 781
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi01g3311 START 4e-47 CL0209