Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3305 ATGGCTCCGCCGCCGGTGGATACCAACGGCGAATCCACCTCCGGTGAGAACCAGAGATCTATCCCCACCCCCTTCCTCACCAAAACCTACCAGCTCGTCGACGATCCCTCCATCGATGACGTCATCTCCTGGAACGACGACGGATCTACCTTCATCGTCTGGAACCCTACCGAATTCGCCAGAGATTTGCTCCCTAAATATTTCAAGCACAACAACTTCTCCAGCTTCGTTCGCCAACTCAACACCTATGGTTTCAGGAAGGTCGTGCCTGATCGGTGGGAATTCTCCAACGATTGTTTTCGCAGAGGCGAGAAACGGCTTCTCTGTGAGATTCAGCGACGCAAGATTTCTTCGTCTTCAACGCCGCCACCGACGTCGCCGGCGGCGAGGTCCGGATCCGCTCCGACCGTCGCAGTTCCGCCGCCGCTGCCGTTGACGTCAATACCGACGGCGATGCCGATCATATCGCCATCAAACTCAGACGAAGAACAAGTAATTTCATCGAATTCGTCGTCGTCAAAAGCTCCGGCAGAGTTGTTGGACGAGAACGACAGGCTGAGAAAAGAGAACGTGCAGCTGTCCAAGGAATTAACAGAGATGAGATCCCTCTGCAACAATATCTTCTCGATGTTATCGAACTACGCTCACAATCATATCGATGGCGTTGTTCAAGGAAAAGACGCCGTGCAACCGCTGGATTTGATGCCGTCGAAGCGGAACCCCGGCGAGGAGGCGCCGCCGTCCTCCGAGGCGGCGGTGGAGGAGCTGAATCCGAAGCTGTTTGGGGTGGCGATCGGAGCGAAGAGATCGAGAGAAGCCACCGGAGAAGGAGGAGGAAGAGGAGGAGAGGAGGATACTCTGTTACGCCTGCATCAACCTGGGCCTGCGGAGGTGAAATCTGAGCCGTTGGATTGTCAGAACCATCGAGAGAATCAGGAGGCACCGTGGATGAATCAATGCGATAATAGAGCGAATCAGAGGGTGTGTAATTAG 993 0.5468 MAPPPVDTNGESTSGENQRSIPTPFLTKTYQLVDDPSIDDVISWNDDGSTFIVWNPTEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNDCFRRGEKRLLCEIQRRKISSSSTPPPTSPAARSGSAPTVAVPPPLPLTSIPTAMPIISPSNSDEEQVISSNSSSSKAPAELLDENDRLRKENVQLSKELTEMRSLCNNIFSMLSNYAHNHIDGVVQGKDAVQPLDLMPSKRNPGEEAPPSSEAAVEELNPKLFGVAIGAKRSREATGEGGGRGGEEDTLLRLHQPGPAEVKSEPLDCQNHRENQEAPWMNQCDNRANQRVCN 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3305 330 Coils Coil 183 203 - -
Mibi01g3305 330 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Mibi01g3305 330 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi01g3305 330 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi01g3305 330 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi01g3305 330 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi01g3305 330 MobiDBLite consensus disorder prediction 266 330 - -
Mibi01g3305 330 MobiDBLite consensus disorder prediction 311 330 - -
Mibi01g3305 330 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi01g3305 330 MobiDBLite consensus disorder prediction 7 22 - -
Mibi01g3305 330 MobiDBLite consensus disorder prediction 1 22 - -
Mibi01g3305 330 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 14 242 IPR027725 -
Mibi01g3305 330 MobiDBLite consensus disorder prediction 114 183 - -
Mibi01g3305 330 MobiDBLite consensus disorder prediction 232 251 - -
Mibi01g3305 330 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi01g3305 330 MobiDBLite consensus disorder prediction 151 177 - -
Mibi01g3305 330 MobiDBLite consensus disorder prediction 114 132 - -
Mibi01g3305 330 MobiDBLite consensus disorder prediction 273 287 - -
Mibi01g3305 330 FunFam Heat stress transcription factor B-4 17 115 - -
Mibi01g3305 330 Gene3D - 17 115 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3305 Mibi-ChrMibi01 58128705 58129776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3305 1 330 HSF AT5G62020 48.424 1.26e-93 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mibi01g3305 HSF_DNA-bind 2.1e-33 CL0123