Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3292 ATGGGGAGGCAGCCAACTGATAAGGCAAAACCAAAACACAGGAAAGGGTTATGGTCACCTGAAGAAGACAATAAACTCAGAAACTATATCATCAAGCATGGCCATGGCTGCTGGAGCTCTGTTCCCATCAATGCAGGCTTGCAGAGGAATGGAAAGAGTTGCAGATTGAGGTGGATCAATTATCTAAGGCCAGGACTGAAGAGAGGGATGTTCAGCAAACAAGAGGAGGAGACAATCTTGACCCTTCACCACATGCTAGGCAACAAGTGGTCTCAGATAGCACAGCATTTACCAGGAAGGACAGATAATGAGATAAAGAACCACTGGCATTCATATTTGAAAAAGAAAGTGGCCAAGGCAGAGGAAATAAAATCTCATAATAATAAACAAATGCAGTATGCTAGCTCAAGCTCAGATACATTTGATTCTTCATCATCAAGTCAAAAACCAGCAATTCCAATCTCTGATCACTTCTCTTCTGTGCAAAACTCTAGCTTCATCAAAGAGGCTGGTCAGAGCTCCTTACCAAAACTTCTATTTGCTGAGTGGCTTTCACTAGATCAAGCAAATAGTGGGATCCCTGCAAATTCAGGTGACGACCCTTTTGTGTTTGGAAATGGAAGTTTTGATCAGTACTCAGATTTCCACGAAGCCGCAATGCATGGAGGCTTATCAGAAGGAGGAAGCTATGGTGGAGAGTTTGATAATGGTCTAACAACCCCAAATGCTGCATCAGCTAATGAAGTCTTCAATGCACAGTTCAAGATAGCAAATCAATTGGCAGGAAATGAGATCATCCATTTCCCAAGTTTCAGCATGAACAATGATGAATTGTACATATAG 843 0.4211 MGRQPTDKAKPKHRKGLWSPEEDNKLRNYIIKHGHGCWSSVPINAGLQRNGKSCRLRWINYLRPGLKRGMFSKQEEETILTLHHMLGNKWSQIAQHLPGRTDNEIKNHWHSYLKKKVAKAEEIKSHNNKQMQYASSSSDTFDSSSSSQKPAIPISDHFSSVQNSSFIKEAGQSSLPKLLFAEWLSLDQANSGIPANSGDDPFVFGNGSFDQYSDFHEAAMHGGLSEGGSYGGEFDNGLTTPNAASANEVFNAQFKIANQLAGNEIIHFPSFSMNNDELYI 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3292 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mibi01g3292 280 CDD SANT 71 113 IPR001005 -
Mibi01g3292 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Mibi01g3292 280 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Mibi01g3292 280 Gene3D - 15 67 - -
Mibi01g3292 280 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Mibi01g3292 280 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Mibi01g3292 280 SMART sant 14 64 IPR001005 -
Mibi01g3292 280 SMART sant 67 115 IPR001005 -
Mibi01g3292 280 CDD SANT 18 62 IPR001005 -
Mibi01g3292 280 PANTHER MYB DOMAIN PROTEIN 55 1 171 - -
Mibi01g3292 280 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Mibi01g3292 280 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mibi01g3292 280 MobiDBLite consensus disorder prediction 125 154 - -
Mibi01g3292 280 FunFam MYB transcription factor 12 68 - -
Mibi01g3292 280 FunFam MYB transcription factor 70 143 - -
Mibi01g3292 280 MobiDBLite consensus disorder prediction 127 154 - -
Mibi01g3292 280 Gene3D - 70 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3292 Mibi-ChrMibi01 58007107 58009074 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3292 8 184 MYB Transcription Factor Family AT3G48920 55.866 4.26e-63 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi01g3292 Myb_DNA-binding 2.5e-12 CL0123