Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3261 ATGGGGTTTTCTTTTTCACCACCACTTACTTTCCTCTTCTCTTTTCTAGTTTTTGCTTTCTTGAACTTAAAATGGGTATGTGGGGATACAGAGCTAAGAGCACTTATGGATATCAAAGCCGCTTTGGACCCAGAAAGCCATTATCTTTCCTCGTGGACCATTAATGGAAAACTATGTGATGGTTCATTTGAGGGAGTGGGTTGTAACGAGAAGGGTCAAGTGGCTAACATTTCATTGCAGGGAAAAGGTATCTCAGGGAAGCTTTCACCTGCCATTGCAGAGCTCAAGCAACTTACAGGGCTTTACTTGCATTATAACTCCTTGCAAGGACCTATTCCCAGAGAAATTGCTAACTTGACTCACCTAAGTGACTTGTATTTGAATGTGAATAATCTATCTGGTGAAATCCCTTCTGAGATTGGCAAAATGGAGAACCTGCAAGTTTTGCAGCTTTGCTATAATCAGTTGACTGGAAGCATACCAACACAGATTGGTGCACTGAAGAAGCTTGTGGTTCTTGCTCTGCAGTCAAATCAATTAGCTGGTGCCATACCTGCAAGCCTAGGTAATTTGGGAATGCTAATGAGGCTCGATCTAAGCTCTAATCGCCTCTTTGGTTCCCTTCCCTCTACATTGGCCGATGCTCCTTCGCTTCGAGTCCTAGATGTTCGCAATAACACCCTCTCTGGAAGTGTACCTCCTGCTCTGAAGAAGCTAGATGATGGATTTCTGTATGAGTACAATCTGGGATTATGTGGAGTTGGGTTTTCATCCTTGAAAACTTGCAATGCTTCGGATAATAGTAATCCCGAAAGATCCAATAAGCCTTATGGGGCAGGTTTCGGTGGCACATCAGCAAAAGATATACCAGAAACTGCAAATGTGCCACTTCCTTGCAATGGAACTACTCAGTGTCAAAATTCATCAAAACCCAAACAATCAGCATCTATTGTTGTTGGCATAGTTGTGTTTGCAATAGCAGTGCCAGCTGTTGGTGTTCTAACTTTCACACAATATCGTAGGCGAAAACAAAAGCTGGGAAACTCATTTAACATCTCAGATAATGGTAAAATCATGAACCAAGCCAAGTGTACATACCAAAAAAATGGATCTCCTTTGGCCAGCCTAGAGTACTCCAATGGCTGGGACCCGTTGGCTGAAAGCCGGAATTTCATGGGGGATAGCCATGATGTGTTCCACAGCTTCAGATTTAACTTGGAAGAGGTTGAGACTGCTACTCAGTATTTCTCAGAGTTGAACTTGTTGGGCAAGAGTATCTTCAGCGCGACTTACAAGGGAATGTTAAGAGATGGATCTGTTGTTGCCATTAAAAGAATTAGTAAAACAAGCTGCAAGAGTGATGAGTCTGAGTTCTTGAAGGGTCTACACGTTTTGACCTCGCTGAGGAACGAGAATCTAGTTAGGTTGAGAGGATTTTGTTGCTCTAGGGGGCGAGGAGAGTGCTTTCTGGTCTATGATTTTGTTCATAATGGAAACCTTTCATGCTACCTCGATGTCAATGAAGGCGAAGGACAAGTCCTTGAATGGTCGACTAGAGTTTCTATTGTTAAAGGCATTGCCAAAGGAATAGCATATTTGCATGCATACAAACCAAACAAGCCAGCCCTTGTTCATCAAAACATCTCGGCTGAGAAAGTGCTTATTGATCAGCGATTCAACCCAATGCTTTTGGATTCTGGCCTTCACAATCTTCTTACTGATGACATTGTCTTCTCAGTACTGAAGGCTAGTGCAGCAAAGGGTTATCTAGCTCCTGAATACACGACCACTGGCAGGTTTACAGAGAAAAGTGATGTGTATGCTTTTGGAGTGCTTCTTTTCCAGATCATATCAGGGAAGAGGAAGATCACTAGCTCGATGCGCCTCGCAGCAGAATCCTCCAGACTTGAAGAACTCATTGACTCAGATCTCCATGGAAGATTCATTGAACATGAGGCTTCAAAGTTAGCAAAAATGGCCTTGCTTTGCTCCCATGAGTCTCCCTTTGAGAGGCCATTGATGGAAGCCATTGTTCTAGAACTTGAAAGTCTCAACTTATGTATCTGA 2067 0.4301 MGFSFSPPLTFLFSFLVFAFLNLKWVCGDTELRALMDIKAALDPESHYLSSWTINGKLCDGSFEGVGCNEKGQVANISLQGKGISGKLSPAIAELKQLTGLYLHYNSLQGPIPREIANLTHLSDLYLNVNNLSGEIPSEIGKMENLQVLQLCYNQLTGSIPTQIGALKKLVVLALQSNQLAGAIPASLGNLGMLMRLDLSSNRLFGSLPSTLADAPSLRVLDVRNNTLSGSVPPALKKLDDGFLYEYNLGLCGVGFSSLKTCNASDNSNPERSNKPYGAGFGGTSAKDIPETANVPLPCNGTTQCQNSSKPKQSASIVVGIVVFAIAVPAVGVLTFTQYRRRKQKLGNSFNISDNGKIMNQAKCTYQKNGSPLASLEYSNGWDPLAESRNFMGDSHDVFHSFRFNLEEVETATQYFSELNLLGKSIFSATYKGMLRDGSVVAIKRISKTSCKSDESEFLKGLHVLTSLRNENLVRLRGFCCSRGRGECFLVYDFVHNGNLSCYLDVNEGEGQVLEWSTRVSIVKGIAKGIAYLHAYKPNKPALVHQNISAEKVLIDQRFNPMLLDSGLHNLLTDDIVFSVLKASAAKGYLAPEYTTTGRFTEKSDVYAFGVLLFQIISGKRKITSSMRLAAESSRLEELIDSDLHGRFIEHEASKLAKMALLCSHESPFERPLMEAIVLELESLNLCI 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3261 688 Pfam Protein tyrosine and serine/threonine kinase 420 680 IPR001245 GO:0004672|GO:0006468
Mibi01g3261 688 Pfam Leucine rich repeat 169 228 IPR001611 GO:0005515
Mibi01g3261 688 SUPERFAMILY Protein kinase-like (PK-like) 398 683 IPR011009 -
Mibi01g3261 688 SUPERFAMILY L domain-like 27 238 - -
Mibi01g3261 688 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Mibi01g3261 688 FunFam Leucine-rich repeat receptor-like kinase 30 140 - -
Mibi01g3261 688 Gene3D Phosphorylase Kinase; domain 1 387 494 - -
Mibi01g3261 688 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 309 683 - -
Mibi01g3261 688 FunFam Protein NSP-INTERACTING KINASE 2 387 494 - -
Mibi01g3261 688 FunFam Protein NSP-INTERACTING KINASE 2 141 263 - -
Mibi01g3261 688 MobiDBLite consensus disorder prediction 263 283 - -
Mibi01g3261 688 Gene3D Transferase(Phosphotransferase) domain 1 495 686 - -
Mibi01g3261 688 Gene3D Ribonuclease Inhibitor 25 278 IPR032675 -
Mibi01g3261 688 FunFam Protein NSP-INTERACTING KINASE 2 495 685 - -
Mibi01g3261 688 ProSiteProfiles Protein kinase domain profile. 416 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3261 Mibi-ChrMibi01 57687783 57690611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3261 26 529 Miscellaneous Gene Families AT4G22730 55.859 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Mibi01g3261 PK_Tyr_Ser-Thr 3.2e-34 CL0016