Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3238 ATGAAGGAAGTCTCATGTGTGGATACTGAGGAGTCTGGGCAAACTAGCTTGAAGGTTGTATTTGACAAGTTGGTGAAGGAACAACGGGAATCTGTAGACTTTGAACTTCCAGATTGGTTTAATAAGTGGAAGTCAATGCCATACACCTCTATAAAACGCAATATATATCGCACGAAGAAGGTCAGGAAACGACTTGATGATGATAATGGCATTTTCTGTTCTTGTACTCCCTCAGCTGGATCTTCTAGTGTATGTGGTAAAGATTGCCTCTGTGGGATGCTGTTCTCTACTTGCTCTTCAGGCTGTAAATGTGGGAGCTCCTGTCTGAACAGACCATTTCATAGTCGACCCATGAAGAAGATGAAACTGGTCAAGACAGAGAAATGTGGTTCAGGAATCGTGGCAGATGAGGATATTGAGCAAGGGGATTTTGTGATAGAATATGTAGGAGAAGTCATTGATGACAAAGAATGTGAACGTAGGCTTTGGAATATGAAACATCGAGGGGAGAAAAACTTCTACTTATGCGAAATCAACCGAGATATGGTGATTGATGCAACATTCAAGGGAAACAAATCAAGATACATCAACCATAGTTGCTGCCCCAACACTGAGATGCAGAAATGGATAATTGATGGTGAAACGAGAATTGGCATTTTTGCGAGTCGTAACATTAAAAAGGGGGAACATCTGACATATGATTACCAGTTTGTTCAGTTTGGTGCAGATCAGGATTGTCATTGTGGTGCTGTTACATGCAGGCGTAAGCTGGGGGTTCGACCACCCAAGCCCAAAATGGCTTCTGATGCTGCATTAAAATTAGTTGCATATCAGGTTTATCAAAATGGAGGGTTGCATACAGGAAGTCCTCATGTTGGCCAACAAAAATGCTCGCACAATTGCATTGGTCAAGTTGTTAGAATATATGAGAGGTTTGGGATTATAAAGCGGTTTGATAATTATTCCAAAAAGCATTTGATTTTGTTTGATGATGGCACAGTTGGCACTGTTAATTTTCTTGACATGTCAGAAGAAGACTGGGAACTTGTGAGACTGTGA 1059 0.4108 MKEVSCVDTEESGQTSLKVVFDKLVKEQRESVDFELPDWFNKWKSMPYTSIKRNIYRTKKVRKRLDDDNGIFCSCTPSAGSSSVCGKDCLCGMLFSTCSSGCKCGSSCLNRPFHSRPMKKMKLVKTEKCGSGIVADEDIEQGDFVIEYVGEVIDDKECERRLWNMKHRGEKNFYLCEINRDMVIDATFKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFASRNIKKGEHLTYDYQFVQFGADQDCHCGAVTCRRKLGVRPPKPKMASDAALKLVAYQVYQNGGLHTGSPHVGQQKCSHNCIGQVVRIYERFGIIKRFDNYSKKHLILFDDGTVGTVNFLDMSEEDWELVRL 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3238 352 FunFam Histone-lysine N-methyltransferase 34 274 - -
Mibi01g3238 352 ProSiteProfiles AWS domain profile. 68 117 IPR006560 GO:0005634|GO:0018024
Mibi01g3238 352 SMART set_7 119 242 IPR001214 GO:0005515
Mibi01g3238 352 SMART PostSET_3 242 258 IPR003616 -
Mibi01g3238 352 SMART shorttest3 68 118 IPR006560 GO:0005634|GO:0018024
Mibi01g3238 352 CDD SET_ASHR3-like 120 258 - -
Mibi01g3238 352 ProSiteProfiles SET domain profile. 119 236 IPR001214 GO:0005515
Mibi01g3238 352 SUPERFAMILY SET domain 28 248 IPR046341 -
Mibi01g3238 352 Pfam SET domain 130 235 IPR001214 GO:0005515
Mibi01g3238 352 ProSiteProfiles Post-SET domain profile. 242 258 IPR003616 -
Mibi01g3238 352 PANTHER SET DOMAIN PROTEINS 18 271 - -
Mibi01g3238 352 Gene3D SET domain 17 273 IPR046341 -
Mibi01g3238 352 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 41 296 IPR025787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3238 Mibi-ChrMibi01 57198371 57203165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3238 98 254 C2H2 Transcription Factor Family AT2G23740 35.593 4.06e-23 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mibi01g3238 SET 3.1e-19 No_clan