Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3234 ATGGACTCTGGAAATTGTCATGTTGAATTATGTAAAAGGCCAAGCCCTTCTTCTTTTTCAGCCTTTAGTGCTGAAGATCTTAAAGAACAGAAAAAGATAATGGTAGTAAGGTACAAAGAATGCCTCAAGAACCATGCAGCTTCATTGGGTGGACATGCAATTGATGGTTGTGGTGAGTTCATTTCTTCTTCTTCAGAAGATCAAGAAGGTTCACTTGATGCTTTCAAGTGCTCAGCCTGCAATTGCCACAGAAACTTCCACAGAAAAGAGATTCAATACTGTTATTCAAACTCGGATCAGAATTATCTCACCCCATTGATTCCAAACACATCCCAGATCATAAACCCCATCATTTTGGACCATCTTTTATTATCTCCCAACAAAAGTGGCTCAAATCTTTCTGAACAGTCACATGATCATGGGGAAGAAGAAGAATGTAGGAATCATTACGATAAAGAGGTTGGTAAACCAGAAGAAGAAGAGAAGGCGATGAGGATGAAGAAGAGGTTTAGGACTAAGTTCAGTGCAGAGCAGAAGGAGAAGATGTTGAGATTTGCAGAGAAGGTAGGGTGGAAGATGCAGAAGGTTGAAGAACCTGTGGTGCAGCAGTTCTGTGAAGAGATAGGAATTAAGAGGAGAGTCCTCAAAGTGTGGATTCACAATAATAAGAACACTTATGCCAATAACTTGTGA 693 0.4012 MDSGNCHVELCKRPSPSSFSAFSAEDLKEQKKIMVVRYKECLKNHAASLGGHAIDGCGEFISSSSEDQEGSLDAFKCSACNCHRNFHRKEIQYCYSNSDQNYLTPLIPNTSQIINPIILDHLLLSPNKSGSNLSEQSHDHGEEEECRNHYDKEVGKPEEEEKAMRMKKRFRTKFSAEQKEKMLRFAEKVGWKMQKVEEPVVQQFCEEIGIKRRVLKVWIHNNKNTYANNL 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3234 230 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 28 225 - -
Mibi01g3234 230 MobiDBLite consensus disorder prediction 135 161 - -
Mibi01g3234 230 SUPERFAMILY Homeodomain-like 163 226 IPR009057 -
Mibi01g3234 230 MobiDBLite consensus disorder prediction 129 161 - -
Mibi01g3234 230 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 167 224 IPR006455 -
Mibi01g3234 230 FunFam Zinc-finger homeodomain protein 2 155 228 - -
Mibi01g3234 230 Pfam ZF-HD protein dimerisation region 36 91 IPR006456 -
Mibi01g3234 230 Gene3D - 153 229 - -
Mibi01g3234 230 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 37 91 IPR006456 -
Mibi01g3234 230 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 38 90 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3234 Mibi-ChrMibi01 57166507 57167199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3234 26 223 ZF-HD Transcription Factor Family AT2G02540 44.550 4.80e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mibi01g3234 ZF-HD_dimer 1.6e-27 No_clan