Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3187 ATGCCGCCATCATCAACCTCTCAAGTCATCACCTGCAAAGCTGCGTTGGCTTATGGAGCTGGAGAGCCATTGGTGGTTGAGGAAGTTGAAGTGAGCCCTCCTCAACCTTCGGAGATTCGGATTAAAGTTGTCTCCACCTCTCTCTGTCGCAGCGATCTCACTGCTTGGGAATCCTATACCATATTTCCTCGAATATTTGGCCATGAAGCATCAGGGATTGTTGAGAGTGTGGGCGAGGGAGTGACTGAATTCAAGGAGGGAGACCATGTGCTAACCGCCTTCATTGGAGAATGCATGACATGCAGGCTGTGCAAATCTGGAAAAACAAACATATGTCAAGTTCTGGGATTGGAAAGAAGTGGTTTAATGCATAGTGATCAAAAGACACGTTTTTCAGTAAAAGGGAAGCCTGTTTATCACTATTGTGCTGTTTCAAGTTTCAGTGAATACACAGTAGTGCATTCTGGGTGTGCAGTCAAAGTCAGCCCAAATGCTCCTCTGGAGAAAATATGCCTTTTGAGCTGTGGTGTTGCTGCAGGTCTGGGTGCTGCATGGAATGTTGCTAATGTATCAGAAGGATCAACAGTGGTGATATTTGGACTTGGAACTGTTGGACTTTCTGTTGCACAAGGTGCTAAACTTAGGGGGGCATCTCGGATAATTGGTGTGGACAAAAACCCTCAGAAGTGTGAAAAGGCTAAAGCTTTTGGAGTTACAGAAGTTATTAATCCAAATTCCTATGACGAACCCATCGCTCAGGTGATTAAGTGCATTTCCAATGGTGGAGCCGATTTCTCTTTCGAATGCGTAGGTGATACTGATATGATAACCACTGCATTGCAGTCATGCTGTGATGGATGGGGTATGACTGTTACCCTTGGTGTGCCAAAAGTGAAGCCTGAGATGTCAGCTCATTATGGACTATTATTAATGGGAAGAACATTGAAAGGATCTTTGTATGGAGGATGGAAACCCAAATCTGATTTGCCTTCATTAGTAGAGAAATATGTGAATAAGGAAATCCAGATTGATGATTACATAACACACAATTTGCCATTCGAAGAAATTAACAAAGCTTTCAATCTCATGAGGGAAGGAAAGTGCCTGCGTTGTGTTATCCACATGACTAGTTAA 1134 0.4347 MPPSSTSQVITCKAALAYGAGEPLVVEEVEVSPPQPSEIRIKVVSTSLCRSDLTAWESYTIFPRIFGHEASGIVESVGEGVTEFKEGDHVLTAFIGECMTCRLCKSGKTNICQVLGLERSGLMHSDQKTRFSVKGKPVYHYCAVSSFSEYTVVHSGCAVKVSPNAPLEKICLLSCGVAAGLGAAWNVANVSEGSTVVIFGLGTVGLSVAQGAKLRGASRIIGVDKNPQKCEKAKAFGVTEVINPNSYDEPIAQVIKCISNGGADFSFECVGDTDMITTALQSCCDGWGMTVTLGVPKVKPEMSAHYGLLLMGRTLKGSLYGGWKPKSDLPSLVEKYVNKEIQIDDYITHNLPFEEINKAFNLMREGKCLRCVIHMTS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3187 377 FunFam S-(hydroxymethyl)glutathione dehydrogenase 180 318 - -
Mibi01g3187 377 FunFam Alcohol dehydrogenase 6 15 193 - -
Mibi01g3187 377 Gene3D - 180 318 - -
Mibi01g3187 377 Pfam Zinc-binding dehydrogenase 204 327 IPR013149 -
Mibi01g3187 377 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Mibi01g3187 377 PANTHER ALCOHOL DEHYDROGENASE 8 373 - -
Mibi01g3187 377 SUPERFAMILY GroES-like 326 374 IPR011032 -
Mibi01g3187 377 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 166 339 IPR036291 -
Mibi01g3187 377 Pfam Alcohol dehydrogenase GroES-like domain 37 160 IPR013154 -
Mibi01g3187 377 SUPERFAMILY GroES-like 6 185 IPR011032 -
Mibi01g3187 377 Gene3D - 16 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3187 Mibi-ChrMibi01 56044856 56047990 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3187 38 175 Monolignol Biosynthesis Gene Families AT4G37980 26.056 8.35e-10 57.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g3187 01 56044856 56047990 Mibi01g3187 01 56044856 56047990 ECH