Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3180 ATGTTCTACGGTGATGATCCACCCCAGATGTGGCACTATGATGATCGATTCCAAGCCAACGATGATAAAGAGAGTCAGAGGAGGAAGGCTTTACGTGTGGCGGCTCGACTATTTGATTGGCATTTCCTACATGGAACTGACTATCATCATCAATTTGTGAGTGAGATTGATGAAGATATATCCAAAAAGATCAATCGCCCTCTTTTACATGTAGCTAATCACCCTGTTGGGCTAGAATCTACTGTTCAGGAAGTGATCTCGCTTTTGGAACTTGGGTCTGATGAGGAGGTTAACATGGTGGGGATATATGGAATTGGTGGGGATGGTAAAACAACAGTTGCACGTGGTGTTTATAATGTCATTGGTGATCAATTTGAGGGTGTATGTTTTCTCGCTGATATTAGAGAGAAGGCAATTAACAAGCATGGACTTGTACAACTTCAAGAGATTCTACTTGCCGAACTTGTTGCAGAAGAAAATCTTAAACTCGGAGATGTTCATAAAGGGATTCCAACCATTAAAAGAACGCTCTGCGTGAAGAAGGTTCTTTTGATTCTTGATGATATTGATACGATCAAACAGTTACAGGCAATTGCCGGCGGACCTGATTGGTTTGGATTTGGCAGTAGGATCATTATCACGGCAAGAAACAAACATTTGCTTACTGCTTATGGGGTGAAAAAATTATATGAGGTGAAAGAGATAAATGCTAATAAATCCCTTGAGTTGTTGAGCTGGAATGCCTTCAAGAACAACAAAGTTGAGCCAGGTTACATCTATGTTGCAAACCGTGCAGTCCTTTATGCTGGTGGCCTTCCGTTGGTTTCAGAGGTAATTGGCTCTAACCTCTTTGGGCAAACAATAGAAGAATGGAATTCTATGCTGGACAAGTATGAAAGAATTCCTCATAGAGAGGTCCATGAAATTCTGAAAGTAAGCGATGATAGTTTTAGAAGTGAATGGACTTACGACGTGTTCCTTAGTTTTAGAGGTAAAGATACCCTCAACAATTTTACCGGCCATCTCTACAATTCTCTAAATCAAAAGGATATTATCACCTTCATTGATGATGTGGATCTCCAAAGAGGAGAAGAAATCACTCCATCTCTTCTCAATGCCATCCAACAATCTAGGATTGCCATCATTGTTTTCTCTGAAAATTATGCTTCCTCTACTTTTTGCCTTGACGAACTTGTCAACATACTTCAGTATGTCAAAAGAGAAGGTCAATTTGTCTGGCCAGTGTTCTACGGTGTTGATCCATCAGAAGTGCGTCACCAGCGTGGGAGTTATCGAAAGGCATTGGAAAAACATGAGGGTCGATTTCAAGCCAACAAGGAGAAAGTGAGTAAGTGGAGGGCAGCTTTATGTGCAGCGGCTAACCTATCTGGCTGGCATTATCAACATGGGTCTCAGCCCGAATATAAATTTATAAATGAGATCATTGAAGAGGTATCCAAAACAATCAATCGCATTCCTTCAAACTGA 1488 0.4086 MFYGDDPPQMWHYDDRFQANDDKESQRRKALRVAARLFDWHFLHGTDYHHQFVSEIDEDISKKINRPLLHVANHPVGLESTVQEVISLLELGSDEEVNMVGIYGIGGDGKTTVARGVYNVIGDQFEGVCFLADIREKAINKHGLVQLQEILLAELVAEENLKLGDVHKGIPTIKRTLCVKKVLLILDDIDTIKQLQAIAGGPDWFGFGSRIIITARNKHLLTAYGVKKLYEVKEINANKSLELLSWNAFKNNKVEPGYIYVANRAVLYAGGLPLVSEVIGSNLFGQTIEEWNSMLDKYERIPHREVHEILKVSDDSFRSEWTYDVFLSFRGKDTLNNFTGHLYNSLNQKDIITFIDDVDLQRGEEITPSLLNAIQQSRIAIIVFSENYASSTFCLDELVNILQYVKREGQFVWPVFYGVDPSEVRHQRGSYRKALEKHEGRFQANKEKVSKWRAALCAAANLSGWHYQHGSQPEYKFINEIIEEVSKTINRIPSN 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3180 495 Pfam NB-ARC domain 79 306 IPR002182 GO:0043531
Mibi01g3180 495 Gene3D - 235 317 IPR042197 -
Mibi01g3180 495 PRINTS Disease resistance protein signature 269 283 - -
Mibi01g3180 495 PRINTS Disease resistance protein signature 176 190 - -
Mibi01g3180 495 PRINTS Disease resistance protein signature 99 114 - -
Mibi01g3180 495 Gene3D - 319 493 IPR035897 -
Mibi01g3180 495 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 316 IPR044974 GO:0006952
Mibi01g3180 495 SUPERFAMILY Toll/Interleukin receptor TIR domain 313 465 IPR035897 -
Mibi01g3180 495 ProSiteProfiles TIR domain profile. 321 485 IPR000157 GO:0007165
Mibi01g3180 495 FunFam Disease resistance protein (TIR-NBS-LRR class) 319 491 - -
Mibi01g3180 495 Pfam TIR domain 323 491 IPR000157 GO:0007165
Mibi01g3180 495 SMART till_3 322 462 IPR000157 GO:0007165
Mibi01g3180 495 Gene3D - 59 228 IPR027417 -
Mibi01g3180 495 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 317 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3180 Mibi-ChrMibi01 55989070 55991194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3180 96 286 WRKY Transcription Factor Family AT5G45050 32.461 2.72e-24 105