Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3145 ATGAGTCGCAGAAACCTTCACATAGCTATCGGAAAAATCGTTCTCTTAAAGAAGAAGGCGGATTTTCTGCTAGGGCTCATAACTCGTCTTCTTTCTCTAGCTCCTTCCTCACTCCTTTTCTCCGCTCTACTGTTATTCAATTCTGATTGTTCAGAAATGGCCGATGCTCATGATAATGACAAGAACATAGAGGTGTGGAAGATCAAGAAGTTGATCAAAGCCTTGGAGGCTGCTCGAGGAAATGGGACAAGCATGATTTCTCTTATCATGCCTCCACGTGATCAGATATCTCGTGTCACCAAAATGCTTGGTGATGAATTCGGAACTGCGTCAAACATAAAAAGCAGAGTGAATCGGCAGTCTGTGCTTGGAGCAATCACTTCTGCTCAGCAGAGGCTTAAGCTGTACAACAAGGTTCCTCCAAAAGGGCTTGTTTTGTATACTGGGACAGTTGTAAATGAAGAGGGAAAGGAGAAGAAGGTGACCATTGATTTTGAGCCATTCAGACCTATCAATGCATCCCTCTATCTGTGTGACAACAAGTTTCACACAGAAGCTCTCAATGAACTTCTGGAATCTGATGACAAGTTTGGTTTTATAGTCATGGATGGAAATGGCACTCTTTTTGGGACCTTGAGTGGCAATACAAGAGAGGTGCTTCATAAATTCAGTGTGGATCTGCCAAAGAAGCATGGAAGAGGAGGCCAGTCAGCCCTACGATTTGCCCGTCTTCGGATGGAAAAGCGTCACAACTATGTGAGGAAGACTGCGGAGCTTGCCACACAGTACTATATTAATCCTGCTACCAGTCAGCCCAATGTTTCAGGATTAATTCTTGCTGGTTCAGCAGACTTCAAAACTGAGCTTAGCCAGTCAGATATGTTTGATCCTCGCCTTCAGGCGAAAATACTTAATGTTTGTGATGTATCTTACGGAGGGGAGAATGGCTTCAATCAAGCTATTGAACTATCATCAGAAATTCTGGCCAATGTAAAGTTCATCCAGGAGAAACGCTTGATTGGAAAATACTTTGAGGAGATTAGTCAGGATACTGGTAAGTATGTTTTTGGGGTTGATGATACTCTTAAAGCACTGGAGATGGGCGCAGTTGAGATACTTATTGTCTGGGAAAATCTGGATATGAATAGATTTGTGCTGAAACACAGCATTAGTGGTGAAGTTGTTATAAAACACTTCACCAAGGAACAAGAGGCCATCCAAGACAACTTTCGGGATCCTGCTAGCAATGCTGAATATGAGGTTCAGGATAAGATGTCTCTTCTGGAGTGGTTTGCCAATGAGTACAGGCGTTTTGGCTGCACTCTTGAATTCGTCACTAATAAATCACAAGAGGGCTCACAGTTTTGCAGGGGTTTTGGTGGTATTGGGGGGATTCTGCGCTACCAGGTTGATATGAGGACCTTTGATGAATTCTCTGATGAAGAAAATGTGTATGATGACTCTGAATAG 1470 0.4306 MSRRNLHIAIGKIVLLKKKADFLLGLITRLLSLAPSSLLFSALLLFNSDCSEMADAHDNDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPKGLVLYTGTVVNEEGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQYYINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVCDVSYGGENGFNQAIELSSEILANVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVEILIVWENLDMNRFVLKHSISGEVVIKHFTKEQEAIQDNFRDPASNAEYEVQDKMSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQVDMRTFDEFSDEENVYDDSE 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3145 489 FunFam Eukaryotic peptide chain release factor subunit 1 54 187 - -
Mibi01g3145 489 Gene3D - 331 489 IPR029064 -
Mibi01g3145 489 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 55 481 IPR004403 GO:0003747|GO:0006415
Mibi01g3145 489 Gene3D eRF1 domain 2 188 329 IPR042226 -
Mibi01g3145 489 Pfam eRF1 domain 2 196 329 IPR005141 -
Mibi01g3145 489 Pfam eRF1 domain 1 70 190 IPR005140 -
Mibi01g3145 489 TIGRFAM aRF1/eRF1: peptide chain release factor 1, archaeal and eukaryotic forms 65 470 IPR004403 GO:0003747|GO:0006415
Mibi01g3145 489 Gene3D eRF1 domain 1 49 187 IPR024049 -
Mibi01g3145 489 SUPERFAMILY L30e-like 330 472 IPR029064 -
Mibi01g3145 489 FunFam Peptide chain release factor subunit 1 331 489 - -
Mibi01g3145 489 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 58 192 IPR024049 -
Mibi01g3145 489 SMART eRF1_1_2 56 192 IPR005140 -
Mibi01g3145 489 SUPERFAMILY Translational machinery components 194 328 - -
Mibi01g3145 489 FunFam Eukaryotic peptide chain release factor subunit 1 188 329 - -
Mibi01g3145 489 Pfam eRF1 domain 3 333 470 IPR005142 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3145 Mibi-ChrMibi01 55441185 55443770 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3145 56 489 Eukaryotic Initiation Factors Gene Family AT1G12920 87.097 0.0 797