Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3131 ATGTTAAAGTTGGCTCGCAGGGGTCAACAATGTGACCCGCACTTGGTGGCACCGGACAAGTTCACGCCCCTGGGCCCCACACACCGACATAGGAAACGGTTGTTTCTGTTTGCTGTGGACGTCATGGTGAGAAAAAGGAGAACTGAAGTGCCCAGGGGAGGCGAAAGCTCCGAAACTCAGGAGAGTGGGGGCATTAGTCGAGGACCTCAACATCCTGCTGAAAGAAGCGATCCACCTTTACAGCAGGCAACAGGAGGGGGAGGATCTCAAGGAGGTAGAGGTTGGGGTCCTCAAGGAGGACGAGGAGGTTATGGTGGGGGTCGGGGTCGTGGGATACCCCAACAGCAGTATGGTGCTCCTCCTGAATACCAAGGAAGGGGGAGGGCAGGGTACGCTCAGCAGTTAGGTCGTGGACGTGGTGGTGGGGGTAATGGCAGTGGCCGTGGTAGTGGACCTTCTTACGGTGGCCCATCTGGACCTCAAGCTCCCGAGCTGCACCAAGCTACCCCTGTTCCACATCATGCTGGGGTGACTCATCAATCCGCAATGTCTGAGGCCAGTTCTTCTTCCCAACAGTTTGAGCCCTCACAAGTGGAACAACAACTAGGGCAGATGACGATTCGTACAGAATCTGTCTCTCCCGCCCCTCCCTCAAGTAAATCAGTGAGGTTTCCCCTCAGGCCTGGAAAGGGTAGCTATGGCACCAAGTGTGTAGTTAAGGCTAACCACTTCTTTGCAGAGTTACCTAACAAAGATTTGCATCAGTATGATGTCACTATCACTCCAGAAGTGACATCAAGGGGTGTCAACCGTGCTGTTATGGCTCAGCTGGTGAGGTTATATCGGGAGTCTCATCTAGGTAGGAGACTTCCTGCATATGATGGCCGTAAGAGCCTTTATACTGCGGGTCCGCTTCCTTTCATTTCAAAGGAGTTCAAAATCACTCTCCTTGATGAAGATGATGGATCGGGAGGGCCAAGAAGAGAGAGGGAGTTCAAAGTTGTGATAAAACTGGCTGCTAGAGCAGATCTACATCATCTAGGACTCTTCCTGCAGGGAAGGCAGACTGATGCTCCTCAAGAAGCTCTTCAGGTTCTTGACATCGTGCTGCGTGAATTACCTACCTCTAGGTATTGTCCTGTGGGGAGATCGTTTTATTCACCAGATCTGGGTAGAAGGCAACCATTAGGTGATGGATTGGAAAGTTGGCGTGGTTTCTATCAAAGTATTCGTCCTACTCAGATGGGATTATCTCTCAACATTGATATGTCCTCGACTGCGTTTTTTGAACCGTTGCCAGTAATAGATTTTGTTACTCAGTTGCTCAATCGAGATGTCTCCTCCCGTCCATTGTCTGATGCAGATCGCGTGAAGATAAAGAAAGCTCTTCGGGGTGTCAAAGTTGAAGTGACACACCGTGGAAATATGAGGAGAAAATACCGCATCTCTGGTCTGACTTCACAAGCAACCCGAGAGCTAACGTTTCCCGTTGATGCGAGTGGAACAGTGAAGTCTGTTGTTGAGTATTTTTCGGAGACATATGGATTTGTCATCCAACATACTCAATGGCCTTGCTTGCAGGTGGGCAATGCTCAGAGACCAAACTATTTACCGATGGAGGTTTGTAAGATAGTAGAAGGTCAAAGGTACTCTAAGAGGCTGAATGAAAAGCAGATTACTGCTTTGCTCAAAGTCACATGCCAGCGTCCTGTTGAAAGGGAGCGTGACATTATGCAGACAGTTCATCATAATGCTTACCGTGATGACCCTTATGCTAAAGAGTTTGGGATTAAAATCAGTGAAAAGCTAGCTCAAGTTGAAGCTCGCATCCTTCCTGCGCCCTGGCTTAAATACCATGATACTGGTAGAGAAAAGGATTGCCTACCTCAAGTTGGCCAATGGAACATGATGAATAAGAAAATGGTCAATGGTGGGACAGTCAACCACTGGATATGCGTCAATTTTTCCAGAAATGTTCAAGATAGTGTTGCACGTGGATTTTGTTATGAACTTGCTCAAATGTGTTGTATATCTGGCATGGCATTCAACTCGGAGCCAGTACTTCCTCCATACAGTGCCCGTCCGGACTTGGTGGATAGGGTTCTGAAAACTCGGTATAATGAGGCAAAAGCCAAACTGGGAAAGAAGGAGCTTGATCTTCTTATTGTTATTTTGCCTGATAATAATGGCTCTCTTTATGGTGACCTGAAACGAATATGTGAGACAGATCTTGGGGTTGTTTCTCAGTGCTGTTTGACCAAGCATGTCTATAAAATGAGCAAGCAGTATCTTGCTAATGTTGCCCTGAAAATAAATGTAAAAGTAGGTGGAAGGAACACAGTGCTTGTTGATGCACTTTCACGGCGCATACCTCTAGTCAGTGATCGACCAACAATTATTTTTGGCGCTGATGTTACTCATCCACATCCTGGAGAGGATTCTAGCCCTTCTATAGCAGCTGTTGTGGCCTCTCAAGATTGGCCTGAAATCACAAAGTATGCTGGTTTGGTGTGTGCTCAAGCTCATAGGCAGGAGCTCATTCAAGATCTCTTCAAACAGTGGCAAGATCCATTAAAGGGAACAGTAACTGGCGGAATGATCAAGGAGCTCCTTATATCTTTCCGGAGAGCCACTGGGCAGAAGCCGCAGCGCATTATATTTTACAGGGATGGTGTAAGTGAGGGGCAGTTCTATCAAGTTTTACTGTTTGAACTCGATGCTATCCGCAAGGCATGTGCATCCCTAGAACCTAATTATCAGCCTCCTGTCACATTTGTGGTGGTTCAGAAGCGCCATCATACAAGGCTGTTTGCCAACAACCATCATGACAGGAGTTTTGTTGACCGGAGTGGAAACATATTGCCTGGCACTGTTGTAGATTCCAAAATTTGTCATCCAACTGAGTTTGACTTTTATCTTTGTAGCCATGCTGGGATTCAGGGAACAAGCCGTCCCGCACATTACCATGTGTTATGGGATGAGAACAATTTTACAGCGGATGCGCTGCAATCATTGACAAATAACCTTTGTTATACATATGCCAGATGCACTCGTTCTGTTTCAATTGTGCCGCCTGCATACTATGCTCATTTGGCTGCCTTCCGAGCTCGATTTTATATGGAACCAGAGACTTCAGAGAGTGGATCCATGACCAGCGGTGCTGCTGCTGCACGTGGAGTAGGTGGAGCAGGACGGAGCGCTCGACCACCGGTTGGCGGGGGTGCTGTTAGGCCTCTTCCTGCACTTAAGGACAATGTCAAGAGGGTTATGTTCTATTGTTGA 3282 0.4759 MLKLARRGQQCDPHLVAPDKFTPLGPTHRHRKRLFLFAVDVMVRKRRTEVPRGGESSETQESGGISRGPQHPAERSDPPLQQATGGGGSQGGRGWGPQGGRGGYGGGRGRGIPQQQYGAPPEYQGRGRAGYAQQLGRGRGGGGNGSGRGSGPSYGGPSGPQAPELHQATPVPHHAGVTHQSAMSEASSSSQQFEPSQVEQQLGQMTIRTESVSPAPPSSKSVRFPLRPGKGSYGTKCVVKANHFFAELPNKDLHQYDVTITPEVTSRGVNRAVMAQLVRLYRESHLGRRLPAYDGRKSLYTAGPLPFISKEFKITLLDEDDGSGGPRREREFKVVIKLAARADLHHLGLFLQGRQTDAPQEALQVLDIVLRELPTSRYCPVGRSFYSPDLGRRQPLGDGLESWRGFYQSIRPTQMGLSLNIDMSSTAFFEPLPVIDFVTQLLNRDVSSRPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDASGTVKSVVEYFSETYGFVIQHTQWPCLQVGNAQRPNYLPMEVCKIVEGQRYSKRLNEKQITALLKVTCQRPVERERDIMQTVHHNAYRDDPYAKEFGIKISEKLAQVEARILPAPWLKYHDTGREKDCLPQVGQWNMMNKKMVNGGTVNHWICVNFSRNVQDSVARGFCYELAQMCCISGMAFNSEPVLPPYSARPDLVDRVLKTRYNEAKAKLGKKELDLLIVILPDNNGSLYGDLKRICETDLGVVSQCCLTKHVYKMSKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKQWQDPLKGTVTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRSFVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADALQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSESGSMTSGAAAARGVGGAGRSARPPVGGGAVRPLPALKDNVKRVMFYC 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3131 1093 MobiDBLite consensus disorder prediction 48 202 - -
Mibi01g3131 1093 Gene3D - 610 783 - -
Mibi01g3131 1093 SMART DUF1785_2 379 431 IPR014811 -
Mibi01g3131 1093 CDD Piwi_ago-like 590 1040 IPR045246 -
Mibi01g3131 1093 SMART Piwi_a_2 720 1041 IPR003165 GO:0003676
Mibi01g3131 1093 SMART PAZ_2_a_3 436 568 IPR003100 GO:0005515
Mibi01g3131 1093 Pfam Argonaute linker 2 domain 572 618 IPR032472 -
Mibi01g3131 1093 FunFam Argonaute 10 610 783 - -
Mibi01g3131 1093 ProSiteProfiles Piwi domain profile. 720 1041 IPR003165 GO:0003676
Mibi01g3131 1093 MobiDBLite consensus disorder prediction 180 202 - -
Mibi01g3131 1093 Pfam PAZ domain 436 562 IPR003100 GO:0005515
Mibi01g3131 1093 Pfam Mid domain of argonaute 629 704 IPR032473 -
Mibi01g3131 1093 Pfam Argonaute linker 1 domain 380 429 IPR014811 -
Mibi01g3131 1093 Pfam N-terminal domain of argonaute 235 370 IPR032474 -
Mibi01g3131 1093 Pfam Glycine-rich region of argonaut 118 212 IPR024357 -
Mibi01g3131 1093 ProSiteProfiles PAZ domain profile. 432 546 IPR003100 GO:0005515
Mibi01g3131 1093 MobiDBLite consensus disorder prediction 1 27 - -
Mibi01g3131 1093 MobiDBLite consensus disorder prediction 208 227 - -
Mibi01g3131 1093 FunFam Protein argonaute-2 425 551 - -
Mibi01g3131 1093 Gene3D paz domain 425 550 - -
Mibi01g3131 1093 MobiDBLite consensus disorder prediction 1046 1071 - -
Mibi01g3131 1093 Pfam Piwi domain 721 1040 IPR003165 GO:0003676
Mibi01g3131 1093 SUPERFAMILY PAZ domain 238 583 IPR036085 GO:0005515
Mibi01g3131 1093 SUPERFAMILY Ribonuclease H-like 707 1041 IPR012337 -
Mibi01g3131 1093 CDD PAZ_argonaute_like 431 545 - -
Mibi01g3131 1093 Gene3D - 789 1093 IPR036397 GO:0003676
Mibi01g3131 1093 FunFam protein argonaute 10-like 789 1093 - -
Mibi01g3131 1093 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 212 1042 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3131 Mibi-ChrMibi01 55293035 55300688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3131 122 1093 Eukaryotic Initiation Factors Gene Family AT1G48410 80.592 0.0 1593