Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3129 ATGCAGGACCAAATAGAAGGAACAAAGTTCAATAGCTCTGGCAATGCTAATAATAAACATTCCAACAATGGCACAAAATCTGAAATTGTTGCCCTATTGAAGGATCAAACTCCTGATGTGAACAACCATACTCCTAAGGTGAGGAAACCATATACCATTTCCAAGCAAAGAGAAAAGTGGACAGAGGAAGAGCATCAGAAGTTCCTTGAAGCTTTGAAACTGTATGGCCGTGGCTGGCGGCAAATTGAAGAACACATAGGTACAAAGACTGCAGTTCAGATTCGAAGTCATGCCCAGAAGTTCTTCTCTAAGGTCGCCCGGGAATGTGATGGCACTGCTGAAAGTTCTATAAAACCAAGTGATATACCTCCTCCTCGGCCAAAGAGGAAACCCTTGCATCCATATCCCCGTAAATCAGTCAATTGTAGCAAAAGACTATCCATAGCAAATGAAGTGGAAAGATCTCCATCGCCGAACCTGGCAGTTGCAGAGAAAGACACTCAATCTCCGACCTCTGTGCTATCTGCATTTAATTCAGAAGTATTTGGGTCGGCATCTTCAGAGCAGCCTAACAGATGTCAGTCACCTAATTCTTGTGCCACTGACGTTCACTCATCCAACTTATCACTATCACCAGTTGAAAAGGAAAATGATTGCATGACATTTGACTCGTCTGTGGAGGAAGAGAAAGGATCTCATACTTCAGTCTCTTTATCTGCTGGTTTGAACTTTCATAAGTCTGAGTTGAGTTCTAAGGATACTGAATCTTCTATCGAAGATGCTACCAACGTGGCCCATGTTACAAGCATTAAGCTGTTTGGAAGAACTATTCGGATGATAGATAACCAGAAGTCACTTGATGTAGATGGGAGAATATCATTGCAATTGCAAGCAAGTAGATGA 903 0.4219 MQDQIEGTKFNSSGNANNKHSNNGTKSEIVALLKDQTPDVNNHTPKVRKPYTISKQREKWTEEEHQKFLEALKLYGRGWRQIEEHIGTKTAVQIRSHAQKFFSKVARECDGTAESSIKPSDIPPPRPKRKPLHPYPRKSVNCSKRLSIANEVERSPSPNLAVAEKDTQSPTSVLSAFNSEVFGSASSEQPNRCQSPNSCATDVHSSNLSLSPVEKENDCMTFDSSVEEEKGSHTSVSLSAGLNFHKSELSSKDTESSIEDATNVAHVTSIKLFGRTIRMIDNQKSLDVDGRISLQLQASR 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3129 300 SUPERFAMILY Homeodomain-like 51 106 IPR009057 -
Mibi01g3129 300 MobiDBLite consensus disorder prediction 112 140 - -
Mibi01g3129 300 Gene3D - 59 106 - -
Mibi01g3129 300 SMART sant 56 104 IPR001005 -
Mibi01g3129 300 Pfam Myb-like DNA-binding domain 57 100 IPR001005 -
Mibi01g3129 300 ProSiteProfiles Myb-like domain profile. 52 102 IPR001005 -
Mibi01g3129 300 FunFam protein REVEILLE 6 isoform X1 59 107 - -
Mibi01g3129 300 CDD SANT 59 102 IPR001005 -
Mibi01g3129 300 PANTHER SWI/SNF COMPLEX-RELATED 16 261 - -
Mibi01g3129 300 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 55 104 IPR006447 GO:0003677
Mibi01g3129 300 MobiDBLite consensus disorder prediction 1 29 - -
Mibi01g3129 300 ProSiteProfiles SANT domain profile. 55 106 IPR017884 -
Mibi01g3129 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 52 106 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3129 Mibi-ChrMibi01 55264892 55266320 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi01g3129 Myb_DNA-binding 8.4e-14 CL0123