Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3121 ATGGAGGGGGATAATGGGCTTGATACAAGGAATTGGGGTTACTATGAACCCGCAACTTCCTTTAAGAATCATCTGGGACTTCAGCTTATGTCGTCCATGCCTGAAAAACCCATGCTTGGAGGGCGCAATGCTGCAGTTTTGGCTGGAAACAACAATGTGGCATTTCACCATAGGGCTTTTGGGATGCCACAAGCAACTTACCCTATGGACTACATGAGGGAAGCTTGGATGAGTCAAAGAGAGAAGTTTTTGAACATGATTCCTACAAATTCAACAAACTATGCTGTTATTCCAGAGGCATCTTCTGGCCATCCCATGCAGTTAATTCAACCGCCTGACTTGAGGAAGGAAGAAAGACCACCGGTGGAAGAGGCTCCCGTTGAGAAGGTCAATGGCCCCAGTAAGAAAAGGCAGGGTCCTAAGGTACCCAAATCTCCCAAGGCAAAGAAGCCCAAGAGAGGACCCCGTGTGCCGAAGGATGAGAACACTCATTCAGTTCAACGAGCAAGGTCTGCGAAGAAAACTACTGAAATTGTGATAAATGGGATTGATTTGGATATTTCGAGTATTCCTATTCCAGTTTGTTCATGCACTGGGACACCTCAACAGTGTTACAGATGGGGTTCTGGTGGGTGGCAATCTGCTTGCTGCACAACAAATATGTCGATTTATCCATTGCCTATGAGTACAAAGCGGCGTGGTGCTAGAATAGCTGGGAGAAAAATGAGTATAGGGGCATTTAAGAAAGTCTTAGAGAAACTTGCAGCTGAGGGTTATAACTTCTCTAATCCAATCGATTTGAAGACTTACTGGGCAAAACATGGCACTAACAAGTTTGTCACTATCAGGTAG 852 0.4531 MEGDNGLDTRNWGYYEPATSFKNHLGLQLMSSMPEKPMLGGRNAAVLAGNNNVAFHHRAFGMPQATYPMDYMREAWMSQREKFLNMIPTNSTNYAVIPEASSGHPMQLIQPPDLRKEERPPVEEAPVEKVNGPSKKRQGPKVPKSPKAKKPKRGPRVPKDENTHSVQRARSAKKTTEIVINGIDLDISSIPIPVCSCTGTPQQCYRWGSGGWQSACCTTNMSIYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLKTYWAKHGTNKFVTIR 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3121 283 MobiDBLite consensus disorder prediction 111 135 - -
Mibi01g3121 283 MobiDBLite consensus disorder prediction 154 171 - -
Mibi01g3121 283 Pfam GAGA binding protein-like family 1 283 IPR010409 -
Mibi01g3121 283 SMART GAGA_bind_2 1 283 IPR010409 -
Mibi01g3121 283 PANTHER - 1 283 IPR010409 -
Mibi01g3121 283 MobiDBLite consensus disorder prediction 96 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3121 Mibi-ChrMibi01 55199339 55200190 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3121 4 283 BBR or BPC Transcription factor family AT2G01930 52.721 6.96e-98 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Mibi01g3121 GAGA_bind 5.5e-110 No_clan