Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3120 ATGGCTGATGTCGTTCGTCAACGTCCCCGCCGCCCCAACCTCTGCCTTAAGCTGCCGAAGCCCACCACCATTTTCCCTTTCTCTGTAGTCGGAGACTTCAATCCTGACCACCTTGAAAGACTCCATGTTCTTGGTCGCGGTAATAGTGGCACCATCTATAAGGTTCGTCACAAGTCAGTTTCTTCCATCTACGCTCTTAAGGTTATCAACTGTGGTTTCGACCCCTTGACTCGCCTGCAGGCCCAACGAGAGGTTGACATCATCCGTCAGATAGACTCCCCATACGTCATAAAGTTCCACGGTTTCTTTGAGTTGCCATCCGGCGACATAGAAATTTTGCTAGAGTACATGGACTTGGGTACGTTAGACACGCTTCTTAAGAAAATCGGCACCTTTTCTGAATCCCAAATCATCGCAGTGGCGCGTCAAGTTCTCACCGGGCTTAGATATCTCCATGCTAACAAGATCGTCCACCATGATATAAAGCCCTCGAATCTGCTAGTAAATAAGAATATGGAGGTGAAGATAAGCGATTTTGGGGTGAGCGAGGTTTTGTTTACCACGTTGGACATGTGTAATTCATCTATTGGTACATGCGCCTACATGAGCCCGGAACAGTTAAACTCGGATAGTAATGGTGGGAATTATAACGGATTTGCGGCTGATATATGGAGCTTGGGTATCACGTTATTTGAACTCTATTTGGGTCGTTTTCCGCTTCTACCGGCGGGTCAGAGACCCGAACGGGTTGAACTGTTGTGTGCTATTTGTCTCAACGACCCGCCGGCTTTGCCAAAGAGTGCATCAAAGGAGTTTCGGAGTTTTATGGAGTGTTGTCTGAAGAAGGATTCGAGTGAGAGGTGGACTGCATCTCAACTTCTGGCACATCCGTTTCTATGTCAATAA 906 0.4746 MADVVRQRPRRPNLCLKLPKPTTIFPFSVVGDFNPDHLERLHVLGRGNSGTIYKVRHKSVSSIYALKVINCGFDPLTRLQAQREVDIIRQIDSPYVIKFHGFFELPSGDIEILLEYMDLGTLDTLLKKIGTFSESQIIAVARQVLTGLRYLHANKIVHHDIKPSNLLVNKNMEVKISDFGVSEVLFTTLDMCNSSIGTCAYMSPEQLNSDSNGGNYNGFAADIWSLGITLFELYLGRFPLLPAGQRPERVELLCAICLNDPPALPKSASKEFRSFMECCLKKDSSERWTASQLLAHPFLCQ 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3120 301 FunFam Mitogen-activated protein kinase 2 119 301 - -
Mibi01g3120 301 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 32 299 - -
Mibi01g3120 301 Gene3D Phosphorylase Kinase; domain 1 23 118 - -
Mibi01g3120 301 SUPERFAMILY Protein kinase-like (PK-like) 36 300 IPR011009 -
Mibi01g3120 301 SMART serkin_6 38 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g3120 301 ProSiteProfiles Protein kinase domain profile. 38 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g3120 301 Gene3D Transferase(Phosphotransferase) domain 1 120 301 - -
Mibi01g3120 301 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Mibi01g3120 301 Pfam Protein kinase domain 39 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g3120 301 CDD PKc_MAPKK_plant_like 36 299 - -
Mibi01g3120 301 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3120 Mibi-ChrMibi01 55176931 55177836 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3120 38 299 MAP Kinase Kinase Gene Family AT1G73500 58.175 6.23e-108 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Mibi01g3120 Pkinase 7.9e-62 CL0016