Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3110 ATGAGACTTGGTATAGGCTATAGGCATTTCATTCAACATGCTCGGAAACTGAGCTCTGCGAAACTGATCAATCAATTTGTTGGTTTCTTGGCGGGCAAGATTTGTGGTCTCGGTGCTGAGGAAAAATGTGATAGCGATACTGATGATGAATATCCTGTCAAAGAAAAGGAAAAGAAAAAAGTCGTAGTGTCTGTTAAATCCTGGTTTGATTTTGGTTTGCAGGGCTTGAAAATGGCAGACTCGAGCTCAGTTGGAATAATTTTGGACTTTCTAAGGAGGAATCGATTTGCAAAAGCTGAGGCAGCTCTTCTCAGTGAACTCAATAATCGTCATGACATAAATGGCTTCCTTGAGAAGCTTAACCTGGAAGAAAAGGCCTCACATAAGTCAGAAAAGGATAAGGGGAAACCTGTGGTAGATAATCAAGGACGGGATTTTCATTACAATGTCGAAGTTTCTGAAGAACTTATTGTGAAAGAAATAGAGTGTGGGACTGGTGGAAATGCAACAGAAAGCAAAGGTAAAAGTACTTCTATTGGAGAATGGAAAAAATCTAATGAAGTGGTTGGTGCAAGTGACAAATACTTTGCTTTCCCCATGAGTTCAGAGGATATGATACTTGACACAAGGAAGTTAAATTTCGGCAATGGTCCTGTGGAGCCTTACCAAAATGGCGGTAGTAGTTCCCATAATACTTTGAAGGTCCTGGTTTCTCAGCAATCAAAACATCAAATAAGTGGAGCTCATGATATGGCCAGCAATAATGCGAAATCTGGAGAGGAAAATGCTGTGACTACTGAGAAACAGTTCTCATGGCCTGGAAGTAGCAGTAGAGCCTCTGTGGAACAAAGATATGGTGCTGAGCTAGTTAAAGAACCTAAGGAACATGATTGCCAAATGAAATCGAAAAACTCATCTTTTAAAGGGAGCTTTGCAGATAATTTATGGTCAAGAAAGGTTGAGAATGAAATTTCATCTTCAGACCTGCAGAATAATTGTTCTGTCAAGGCTGTTTTCCCCCTCTCCGAGGGAGACATGTCTACAAGATATGATGGTACAGCTTTCTCTGAAAGAATAGGGGGTAGGGCAGAAATAATTGGTACTAGGGAGGCAACGAAAATGCATGTAGGTGAAGTGGGGAGAGCTATTGATGTAGTTGATCTACAAGGAAGTTCAGAACAGAAGACTGTTGGCAGCTTAAATTTTCCTGTTGCACCTAAAAATCAAAAGGACGAGTTGCCAAGGCTTCCTCCTGTCAGTCTCAAGTCAGAGGACAAGCTCTTGGCTGTTAACTGGGAGGAGAAATTTGAGCAGGATGGACGTGCTTCCAAAGTTGCTGTTTCTGACAACAATTTACTCAGAGGATCATATTTGGATGGGCCTGGTAGACTAGAAATTAACCTTGCAGGAATGAGGAGAGTTGCAGGGGACAGTTGGCTATCTGCAAATCAAGGGATTACAGAGGATACATCTGATATTGTATCTGGTTTTGCCACTGTTGGTGATGGGTTGGGTGAATCAGTTGACTATTCCAATGAATATTGGGACTCTGATGAATATGACGATGACGATGATGCTGGCTACATGAGACAGCCTATTGAGGATGAGGCCTGGTTTTTGGCACATGAAATTGATTATCCAAGTGACAATGAAAAGGCAACTGGGCGTGAAAGTGTTCCGGATCCTCAGGACAGAGGTCCAGTCAAAGATGAAGATTATGATCAGTCTTTTGGTGAAGATTCTTACTTTTGCGGAGAGCAGTATGTTCAACAAAAGAATGTTGAACCAGTCATAATGTTGGATGATTCTATTGGTTTGACAATAACTGAAATGTATGGAAGTACTAAAGAAAATGGATTAATGGTTCAGTATGATAGACAATTGATGGATGAAGGGCTAAATCTTATGCATGCAAAACCTGTCTGGCAGGGCTTTGTCCCTCAGACCAATGAATTGGTCTTTCCAGGAGATGGGCAGGCTCTGAATAGCAGGGAAAGATCACAACTTGTGGATATATGCATTGATGATTATCAGCATAGTTCAGTTAGGTCAATTGGGGTGGGGATCAATAGTGATGCTGCAGACGTTGGCAGTGAAGATCGTGAAAATTTGGTTGGTGGTAGCAGTGAAGGGAAGTTAGAATATCTCTGTGATTGTAATGTGGGACATGGTTGTTCCAGACACTCTCACTATGATTTGGATAAATTGAACCAAAATAAGTGCAGAAATGGCAAGATTGACTTAGGTAAGTTTGTCACTGGGGATGATAAAGGTGCATTCTTGCAGATGAATGGTCATTCTGATAGAAGCTTCTCATATCCCCAATCACTAAAAGATGGCCAGATGATCCAGACTGGTTCCAGTAAGACCCTGTGGTTAAATAACAGCAATGCTGACGAAAATGATGTCTATCTTAATGAATTTGTGAGACCTGATGACATGCTTACATCTTGGAAGCAGAAAAGCAGCGATTCTTCACCCATTGAAAGTTTAAGGGATGAGAATAATGTTAATGAAGTAAGATCCGCTAACTCTTCCCCGACAGCAGTCTCAAATTATGGATATACTGAAAAAGTGCTGCTCAGGCTAGAAGAAGATGAACAAGTTGAAATTGCAGGGGAGGAAGATTTAGGGGGATTGCTGGATGATGAAGATACTGCAGCTGTTCAAGAGCAATTAAGGCAAATAAAGGCCCAGGAAGAGGAGTTTGAAACCTTCAACTTAAAGATTGTGCATAGGAAAAACAGAACTGGCTTTGAGGAGGACAAGAGTTTCCATGTTGTTTTAAATTCTGTGCTAGCTGGGCGCTATCATGTTACTGAGTATCTGGGATCTGCTGCGTTCAGCAAAGCCATACAAGCTCATGACTTGCAAACAGGCATGGATGTTTGTGTTAAAATAATAAAGAACAACAAGGACTTTTTTGACCAAAGCCTTGACGAGATTAAGCTTCTCAAGTATATTAATAAACATGATCCTGCAGACAAGTATCACATCCTTCGATTGTATGATTATTTCTATTATCGAGAACATTTGTTAATAGTATGTGAACTACTTAAAGCCAACTTATATGAGTTTCAAAAATTTAATAGAGAATCCGGGGGCGAAGTATACTTCACAATGCCAAGATTGCAGTCAATTACTATTCAGTGTTTGGAAGCGCTACAGTTTTTGCACAGTCTTGGACTAATACACTGTGACCTGAAGCCAGAGAATATTTTGGTGAAAAGCTATAGCAGATGTGAGGTGAAGGTCATTGATCTTGGGAGTAGTTGTTTTGAGACTGATCACCTTTGCTCATATGTCCAGTCCAGGTCCTATCGTGCTCCTGAGGTTATATTGGGACTTCCATATGACAAGAAGATTGATATATGGTCACTTGGCTGCATTTTGGCCGAACTTTGTACTGGCAATGTCCTCTTTCAAAATGATTCATCTGCAACATTACTTGCTCGGGTGATTGGCATCATCGGTCCAATTGATCAAAACATGCTTACAAAAGGAAGGGATACATTTAAGTACTTCACCAAAAATCATATGCTTTATGAACGGAATCAGGAAACCAACAGGTTAGAATACTTGATTCCCAAGAAGACATGTTTGAGGCATAGATTGCCAATGGGAGACCAAGGCTTCGTTGACTTTGTTGCTTATTTGCTTGAGGTTAACCCAAAGAAGCGGCCTTCTGCTACTGAGGCCCTTAACCATCCATGGCTATCATACCCTTACGAACCCTTGTCATCTTGA 3747 0.4089 MRLGIGYRHFIQHARKLSSAKLINQFVGFLAGKICGLGAEEKCDSDTDDEYPVKEKEKKKVVVSVKSWFDFGLQGLKMADSSSVGIILDFLRRNRFAKAEAALLSELNNRHDINGFLEKLNLEEKASHKSEKDKGKPVVDNQGRDFHYNVEVSEELIVKEIECGTGGNATESKGKSTSIGEWKKSNEVVGASDKYFAFPMSSEDMILDTRKLNFGNGPVEPYQNGGSSSHNTLKVLVSQQSKHQISGAHDMASNNAKSGEENAVTTEKQFSWPGSSSRASVEQRYGAELVKEPKEHDCQMKSKNSSFKGSFADNLWSRKVENEISSSDLQNNCSVKAVFPLSEGDMSTRYDGTAFSERIGGRAEIIGTREATKMHVGEVGRAIDVVDLQGSSEQKTVGSLNFPVAPKNQKDELPRLPPVSLKSEDKLLAVNWEEKFEQDGRASKVAVSDNNLLRGSYLDGPGRLEINLAGMRRVAGDSWLSANQGITEDTSDIVSGFATVGDGLGESVDYSNEYWDSDEYDDDDDAGYMRQPIEDEAWFLAHEIDYPSDNEKATGRESVPDPQDRGPVKDEDYDQSFGEDSYFCGEQYVQQKNVEPVIMLDDSIGLTITEMYGSTKENGLMVQYDRQLMDEGLNLMHAKPVWQGFVPQTNELVFPGDGQALNSRERSQLVDICIDDYQHSSVRSIGVGINSDAADVGSEDRENLVGGSSEGKLEYLCDCNVGHGCSRHSHYDLDKLNQNKCRNGKIDLGKFVTGDDKGAFLQMNGHSDRSFSYPQSLKDGQMIQTGSSKTLWLNNSNADENDVYLNEFVRPDDMLTSWKQKSSDSSPIESLRDENNVNEVRSANSSPTAVSNYGYTEKVLLRLEEDEQVEIAGEEDLGGLLDDEDTAAVQEQLRQIKAQEEEFETFNLKIVHRKNRTGFEEDKSFHVVLNSVLAGRYHVTEYLGSAAFSKAIQAHDLQTGMDVCVKIIKNNKDFFDQSLDEIKLLKYINKHDPADKYHILRLYDYFYYREHLLIVCELLKANLYEFQKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSSATLLARVIGIIGPIDQNMLTKGRDTFKYFTKNHMLYERNQETNRLEYLIPKKTCLRHRLPMGDQGFVDFVAYLLEVNPKKRPSATEALNHPWLSYPYEPLSS 1248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3110 1248 SMART serkin_6 937 1239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g3110 1248 Coils Coil 889 909 - -
Mibi01g3110 1248 MobiDBLite consensus disorder prediction 548 572 - -
Mibi01g3110 1248 SUPERFAMILY Protein kinase-like (PK-like) 926 1242 IPR011009 -
Mibi01g3110 1248 Pfam Protein kinase domain 937 1239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g3110 1248 PANTHER DUAL SPECIFICITY PROTEIN KINASE 486 1239 - -
Mibi01g3110 1248 Gene3D Transferase(Phosphotransferase) domain 1 991 1239 - -
Mibi01g3110 1248 FunFam Serine/threonine-protein kinase ppk15 1016 1240 - -
Mibi01g3110 1248 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1063 1075 IPR008271 GO:0004672|GO:0006468
Mibi01g3110 1248 ProSiteProfiles Protein kinase domain profile. 937 1239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g3110 1248 Gene3D Phosphorylase Kinase; domain 1 931 1018 - -
Mibi01g3110 1248 CDD PKc_DYRK_like 937 1239 - -
Mibi01g3110 1248 FunFam Putative serine/threonine-protein kinase dyrk2 931 1018 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3110 Mibi-ChrMibi01 55040480 55050795 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3110 935 1234 MAP Kinase Gene Family AT5G19010 30.312 1.83e-28 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Mibi01g3110 Pkinase 1.3e-51 CL0016