Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3096 ATGACAATGCTGCTTCATAAAGTCCCCATTTTTCTCACTCTCTTCCTTCTTTTGCTCCCTCTGGTAAAACCAGATCTCTCTTCTGAGAGACTCGCTCTCCTCTCTCTCCGTTCCTCCGTCGGAGGCCGTACACTTCTCTGGAACACCTCCCAGCAGAGTCCATGCAAGTGGTTCGGAGTTCAGTGCCAAAACGACACTGTCGTTTACCTTCGTCTTCCCGGCGTTGCACTTTCCGGCTCCATACCCACCGGCATTTTCACCAACTTGACCCATCTCCGTACTCTCAGCTTGCGTTTCAATGCCCTCAAAGGTGGGCTCCCTCAAGATCTAGCTTCTTGTGTCAATCTTCGTAACCTTTACTTACAGCAGAATTTGCTCTCTGGTGAAATCCCACATTTTTTGTTTGCTTTGCCTCACTTGGTTCGCCTTAATTTGGCCTCCAACAAATTCTTCGGTTCAATTCCTTTGGGTTTCAACAATCTGACTAGGCTGAGAACTCTGTTCCTTGAGAACAACAATCTCACAGGTGCTATCCCAGACTTAAACCTTGTAAAGCTCGAACAATTCAATGTCTCAAACAACATGTTGAATGGTTCAGTACCAGGAAAGTTGCAAACTTTCGGTAAAAATTCGTTCTTTGGGAACTCCCTTTGTGGGAAACCCCTCAATCTTTGTCCAGCAGATGTCAATGGGACCCGAAACGGAACCGGGAAATCTCCGATTGCGCCGGAGACGCCGGTGATTGTGAACAATGAGGGAGACATGAGCAAGAAAAGGAAGAAACTTTCAGGCGGTGCCATCGCCGGAATCGTTGTCGGTTCAGCGGTGTGTCTTCTGTTGATTCTCTTTGCTATGATCATATTGTGCAGGAAGAGGAGTGATCAGAAGACAAGGAATATGGATATTTTAACTGAGAAGCAACTTGAGGTGGCGATTCGAGGCGGTGCCGGCGCAGGCGACAAGCCGGGACCGGAGCCGGAACACGGTTATGGCTACTCCGCGGTTGCTGTGGTGGCGGAGACCGGCGTGGGGTCGAAAAAGCTCGTATTTTTCGGGAATTCGCCGAAGGTGTTTGATCTTGAGGATTTGCTAAGGGCTTCTGCTGAAGTTTTGGGTAAAGGGACGTTTGGGACGGCGTATAAGGCCACTCTTGAGGATGGGCCGGTGGTGGCGGTGAAGAGATTGAGGGATGTGACAATTTCTGATGGAGAGTTTAAGGAGAAGATAGAATTAGTAGGAGCAATGGATCATGAGAATTTGATCCCTCTCATGGCTTACTATTATAGCAGAGAAGAGAAGCTTCTTGTTTATGATTATATGCCCACTGGAAGTTTATCTGCACTTTTGCATGGAAACAAAGGGACTGGTAGGACCCCACTGAATTGGGAAGTGAGATCAGGCATTGCTCTAGGAGCTGCTAGAGGCATTGAGTTCTTACACTCACAAGGGACTAATGTTTCTCATGGAAACATAAAGTCATCTAACATCCTCCTCACCAGATCTTTGGGTGCTAAAGTCTCGGACTTTGGCCTTGCGCACCTTGCCAGTCCTACCTCCTCCACTCCAAACCGAGTTACCGGTTACCGTGCGCCTGAGGTCACTGATCCTCGCAAGGTATCTCATAAAGCGGACGTTTATAGCTTTGGAGTGTTGCTCTTGGAATTGCTTACTGGGAAGGCTCCAGCCCATGCGCTCTTGAACGATGAAGGAGTAGACCTCCCTAGATGGGTTCAATCCGTTGTTAGAGAAGAGTGGACCTCTGAGGTGTTTGATCTTGAGCTTCTCGGGCATCAGAATGTTGAGGAGGAGATGGTTCAGTTGTTGCAACTTGCAGTTGATTGCGTTGCTCCGTACCCCGACAATCGCCCATCAATGTCAGAAGTGACAAAGCGCATCGAGGAATTACGAGAGGCTAGCTTGAAACGTGATCAAGACCGAATCCAGAATCCTGATCAGATCAAGGATATAGATGATATAACTTCTCACTGA 1989 0.4816 MTMLLHKVPIFLTLFLLLLPLVKPDLSSERLALLSLRSSVGGRTLLWNTSQQSPCKWFGVQCQNDTVVYLRLPGVALSGSIPTGIFTNLTHLRTLSLRFNALKGGLPQDLASCVNLRNLYLQQNLLSGEIPHFLFALPHLVRLNLASNKFFGSIPLGFNNLTRLRTLFLENNNLTGAIPDLNLVKLEQFNVSNNMLNGSVPGKLQTFGKNSFFGNSLCGKPLNLCPADVNGTRNGTGKSPIAPETPVIVNNEGDMSKKRKKLSGGAIAGIVVGSAVCLLLILFAMIILCRKRSDQKTRNMDILTEKQLEVAIRGGAGAGDKPGPEPEHGYGYSAVAVVAETGVGSKKLVFFGNSPKVFDLEDLLRASAEVLGKGTFGTAYKATLEDGPVVAVKRLRDVTISDGEFKEKIELVGAMDHENLIPLMAYYYSREEKLLVYDYMPTGSLSALLHGNKGTGRTPLNWEVRSGIALGAARGIEFLHSQGTNVSHGNIKSSNILLTRSLGAKVSDFGLAHLASPTSSTPNRVTGYRAPEVTDPRKVSHKADVYSFGVLLLELLTGKAPAHALLNDEGVDLPRWVQSVVREEWTSEVFDLELLGHQNVEEEMVQLLQLAVDCVAPYPDNRPSMSEVTKRIEELREASLKRDQDRIQNPDQIKDIDDITSH 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3096 662 PANTHER OS05G0588300 PROTEIN 11 642 - -
Mibi01g3096 662 FunFam pollen receptor-like kinase 1 334 439 - -
Mibi01g3096 662 FunFam Probable inactive receptor kinase RLK902 26 182 - -
Mibi01g3096 662 MobiDBLite consensus disorder prediction 641 662 - -
Mibi01g3096 662 Pfam Leucine rich repeat 80 126 IPR001611 GO:0005515
Mibi01g3096 662 SUPERFAMILY Protein kinase-like (PK-like) 369 632 IPR011009 -
Mibi01g3096 662 FunFam Probable inactive receptor kinase At1g48480 440 643 - -
Mibi01g3096 662 Pfam Protein kinase domain 368 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g3096 662 SUPERFAMILY L domain-like 28 207 - -
Mibi01g3096 662 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Mibi01g3096 662 Gene3D Ribonuclease Inhibitor 182 229 IPR032675 -
Mibi01g3096 662 ProSitePatterns Protein kinases ATP-binding region signature. 371 393 IPR017441 GO:0005524
Mibi01g3096 662 Gene3D Ribonuclease Inhibitor 26 181 IPR032675 -
Mibi01g3096 662 Gene3D Transferase(Phosphotransferase) domain 1 440 660 - -
Mibi01g3096 662 Gene3D Phosphorylase Kinase; domain 1 337 439 - -
Mibi01g3096 662 ProSiteProfiles Protein kinase domain profile. 365 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3096 Mibi-ChrMibi01 54794844 54797579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3096 25 639 Receptor kinase-like Gene Family AT1G48480 62.780 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi01g3096 Pkinase 2.6e-38 CL0016