Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3095 ATGGTTTTCAAGGGAAGGTTTTTCTCCTCCAAGAAATCCGACTCTTCAAGCCCTGATGCCTCCTCCAATAACAGCCCCCGATCACTTGGTTCCAATTCACCATCCAGATCCGACAAGAAGAAGGTCAAATCAACTCTCAAAGATTCCCATACATCCAGTCCCATCGCCGCCGCCGCCGCCGCCTCCTCCGGCAGAGGGCTCGGTGTCGCCTCCGTGCGCCGAAAATTGCAAGTGAAGGAAAGTCAAACTCGACCGGAGTCCCGTTTGACGCCGACGAGGCCGAACTCCGGCGCCGCCGCCGAATTGGATTCGAAATCATCGGCGGCGGCGGCGGTTGACGGGAAGGAATCTCCGTCGTCGTCGTCGGTATCTCCGATTTTGGCATCCTCACTTGGGTTGAACAGGATAAAGACGAGATCAGGACCGTTGCCACAGGAGAGTTTTTTGGGGTTTAGGAATGATAAAGGGTCTAATCTTGGTGCAAGTAATCTTTCTAGAGTTGGTGGTAATGGAAGTGAAGGAAAGAAGAAGGAGTTGGTGAATCAGAGTAGGGTGAAGAGTTCTTCAGGAGGTGGAACTTGGGCTGATAATGGCATCAATTCAGAGAGTACTTCCACTTGGAATGCTCCATCCTGGGATCAAAGCCCTAATTTATCGGCACGGTCTCGGTTACCCAAGGGGGAATCATCTTCCACAGCAGGCAGACAGGATTCATCACCATCCGATTCTGGAGCCTTAAGAAGTGCAGATGGCTGCACTCCAGAGACTTCATATGATTTTGAAAACCCCAAAGAATCTGAATCTCCTCGTTTCCAAGCTATATTACGGGTCACAAGTGCACCCAGAAAGAGGTTTCCTGGCGACATTAAGAGTTTTTCCCATGAGTTGAATTCCAAAGGTGTCCGACCCTATCCATTTTGGAAGCCCCGAGGGTTAAATAACTTGGAGGGGGTTTTGGTTGCTATTCGAGCTAAATTTGATAAAGAAAAGGAAGAAGTGAACTCTGAACTGGCTATTTTTGCGGCATACCTGGTTGGAGTTCTTGAAAAAAATGCCGATTCTCATCCTGAGTGGCAAGAGACAATAGAGGACTTACTGGTTTTGGCTAGGAGGTGTGCTATGACTACACCTGGGGAGTTTTGGCTTCAGTGTGAAGGCATAGTCCAGGAGTTGGATGATCGACGTCAAGAACTTCCTCCTGGGACACTTAAGCACCTTCACACCCGTATGCTTTTCATTCTCACAAGGTGTACTAGATTGTTGCAATTTCACAAAGAAAGTGGTTTGGCTGAGGATGAACATGTCTTTAACCTTCGACAATCTCGAGTCTTGCATTCTGCTGAAAAACGTATTCCTCCTGGCTTGGGAAGGGATGCAAAAAGTTCCACTGCTGCTAAAGGCCCAAATCCCTCAGCCAAAAAATTTTATAGTCAGGAGCAGCGTATATTAGATTGGAAAAAAGATGTAAGGCCAGAGAATCTTTCACTTCCTGTTGGTGATGATAGTTCAAAACTCTTAGAGTCTCCTTCAGGCAGGGATCGGATGGCTTCTTGGAAAAAATTCCCATCTCAACCAGCAAAAAGTGCAAAGGAAGCTTCTCAGTTGAAGGACCAAACCTATGGGAGAGTTGAATCTTCAAAACTTTCAAATAAGGGATCAGATTCTGATGTAGATCTATCTACTGCCAAGCCATCAGAGCATATTCCTGTCAATGACTACCAGGAACACGCTATTAAGAGCCAACAAAAAGTTTCTTGGGGCTACTGGGGAGATCAGCAGAATATCGGTGAAGAAAGTTCAATAATTTGTCGTATATGTGAGGAGCAAGTTCCTACTTCCAATGTTGAAGATCATTCAAGGATTTGTGCTATTGCTGATAGATGTGATCAGAAGAGTCTGAGTGTCAATGAGCGTCTGATCCGAGTTGCTGATACGCTAGAGAAGATGGTAGAATTATGTACACAGAAGGATATCCAACAAGCAGTTGGAAGTCCTGATGTTGCAAAAGTGTCAAATTCAAGCATGACTGAAGAATCTGATGTTATCTCTCCAAAACTCAGTGATTGGTCTCGGAGAGGGTCAGAGGATATGCTAGATTGTCTCCCTGAAGCTGATAATTCGGCTTTCATGGATGACCTAAAGGCCTTACCTCTTATATCATGTAAAACTCGTTTTGGTCCAAGGTCTGACCAAGGAATGACAACATCATCTGCTGGGAGCATGACTCCTAGGTCACCTTTATTGACACCAAAGACGAGTCATATTGACTTGCTCTTGGCAGTGAGGGGTTCCTATTCTGAACAAGATGATATTCCGCTGATGAATGAACTTGCCGATATAGCACGATGTGTAGCAAATACACCTCTGGATGATGATCGCTCAATCTCATATTTATTATCTTGTCTTGATGATTTGAGGGTTGTTGTAGAGAGGAGAAAATTTGATGCACTCACTGTGGAGACCTTTGGATCTTGTATTGAGAAGCTGATACGGGAGAAGTATTTGCAGCTTACTGAAATGGTTGAAGATGAAAAGGTTGACCTTTCTAGCACTGTAATTGAAGAAGATGCTCCTTTGGAAGATGATATGGTTCGTAGCTTGAGAACAAGTCCAATCCACTCTTCTAAGGACCGTACTACTATTGACGACTTTGAGATTATAAAACCCATCAGTCGTGGGGCATTTGGACGGGTTTTTTTGGCTAAAAAGAGAACAACTGGGGATCTTTTTGCTATTAAGGTTCTCAAGAAGGCAGACATGATCCGTAAGAATGCTGTGGAAAGCATATTAGCTGAACGTGATATCTTAATCACAGTGCGCAATCCTTTTGTGGTTCGTTTCTTCTATTCTTTTACATGTAGTGAGAACCTGTACCTCGTCATGGAGTATCTTAATGGAGGAGATCTTTATTCATTATTGAGGAATTTAGGTTGCCTAGATGAGGAAGTTGCTCGTGTGTATATTGCAGAAGTGGTGCTTGCGCTCGAATATTTGCATTCATTGCGAATAGTTCACCGTGACTTGAAGCCTGACAATTTGTTGATTGCACATGATGGTCATATTAAGCTGACAGACTTTGGGCTTTCAAAAGTTGGTCTCATCAATAGCACTGATGATTTGTCTGGTCCAGCAGTGAGTGGGACATCCCTCCTTGGGGAGGATGAACCTCAGTTATCTGCATCAGAACATCAAAGGGAGAGGAGGAAAAAACGTTCTGCTGTGGGCACACCGGATTATTTAGCACCAGAGATACTTTTGGGAACTGGACATGGATATACTGCTGATTGGTGGTCTGTTGGTATCATTTTATTTGAATTGCTTGTTGGCATTCCGCCTTTCAATGCAGAGCATCCTCAGAACATATTTGATAATATTCTTAATCGCCAGATCCCTTGGCCCCATGTTCCTGAAGAAATGAGTCCTGAAGCACTAGATCTGATTGATCGATTATTAACAGAAGATCCTAATCAGAGACTTGGAGCTGGAGGGGCATCAGAGGTGAAGCAACATGTTTTCTTCAAGGATATAAACTGGGACACACTTGCCAGGCAGAAGGCTGCATTTGTCCCTGCCTCTGAGAGTGCTCTAGATACCAGTTATTTCACAAGTCGCTATTCATGGAATACTTCTGATGGCCTTGTTTATCCAGAGAGTGATGTTGAGGATTCTAGTGATGCAGATAGTTTAAGTGGCAGCAGTGGTTGCATGAGCAATCGTCAAGATGAACTGCAAGGAGACGAATGTGAGGGTTTGGCCGAGTTTGAGTCAGGCTTATCTGTCAATTATTCGTTTAGCAATTTCTCCTTCAAGAACCTATCCCAGCTTGCATCTATCAACTATGATCTTCTCACCAAGGGATATAAAGATGATCCACCTACAAATTCTAGCACATAA 3894 0.443 MVFKGRFFSSKKSDSSSPDASSNNSPRSLGSNSPSRSDKKKVKSTLKDSHTSSPIAAAAAASSGRGLGVASVRRKLQVKESQTRPESRLTPTRPNSGAAAELDSKSSAAAAVDGKESPSSSSVSPILASSLGLNRIKTRSGPLPQESFLGFRNDKGSNLGASNLSRVGGNGSEGKKKELVNQSRVKSSSGGGTWADNGINSESTSTWNAPSWDQSPNLSARSRLPKGESSSTAGRQDSSPSDSGALRSADGCTPETSYDFENPKESESPRFQAILRVTSAPRKRFPGDIKSFSHELNSKGVRPYPFWKPRGLNNLEGVLVAIRAKFDKEKEEVNSELAIFAAYLVGVLEKNADSHPEWQETIEDLLVLARRCAMTTPGEFWLQCEGIVQELDDRRQELPPGTLKHLHTRMLFILTRCTRLLQFHKESGLAEDEHVFNLRQSRVLHSAEKRIPPGLGRDAKSSTAAKGPNPSAKKFYSQEQRILDWKKDVRPENLSLPVGDDSSKLLESPSGRDRMASWKKFPSQPAKSAKEASQLKDQTYGRVESSKLSNKGSDSDVDLSTAKPSEHIPVNDYQEHAIKSQQKVSWGYWGDQQNIGEESSIICRICEEQVPTSNVEDHSRICAIADRCDQKSLSVNERLIRVADTLEKMVELCTQKDIQQAVGSPDVAKVSNSSMTEESDVISPKLSDWSRRGSEDMLDCLPEADNSAFMDDLKALPLISCKTRFGPRSDQGMTTSSAGSMTPRSPLLTPKTSHIDLLLAVRGSYSEQDDIPLMNELADIARCVANTPLDDDRSISYLLSCLDDLRVVVERRKFDALTVETFGSCIEKLIREKYLQLTEMVEDEKVDLSSTVIEEDAPLEDDMVRSLRTSPIHSSKDRTTIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCSENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLRIVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTSLLGEDEPQLSASEHQRERRKKRSAVGTPDYLAPEILLGTGHGYTADWWSVGIILFELLVGIPPFNAEHPQNIFDNILNRQIPWPHVPEEMSPEALDLIDRLLTEDPNQRLGAGGASEVKQHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGLVYPESDVEDSSDADSLSGSSGCMSNRQDELQGDECEGLAEFESGLSVNYSFSNFSFKNLSQLASINYDLLTKGYKDDPPTNSST 1297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3095 1297 ProSiteProfiles AGC-kinase C-terminal domain profile. 1174 1279 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mibi01g3095 1297 SUPERFAMILY Protein kinase-like (PK-like) 881 1210 IPR011009 -
Mibi01g3095 1297 MobiDBLite consensus disorder prediction 1 271 - -
Mibi01g3095 1297 MobiDBLite consensus disorder prediction 1045 1074 - -
Mibi01g3095 1297 Gene3D Phosphorylase Kinase; domain 1 882 1202 - -
Mibi01g3095 1297 Coils Coil 312 332 - -
Mibi01g3095 1297 CDD STKc_MAST_like 890 1178 - -
Mibi01g3095 1297 ProSiteProfiles Protein kinase domain profile. 884 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g3095 1297 MobiDBLite consensus disorder prediction 1058 1074 - -
Mibi01g3095 1297 Pfam Protein kinase domain 884 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g3095 1297 MobiDBLite consensus disorder prediction 183 246 - -
Mibi01g3095 1297 MobiDBLite consensus disorder prediction 1225 1240 - -
Mibi01g3095 1297 MobiDBLite consensus disorder prediction 493 572 - -
Mibi01g3095 1297 MobiDBLite consensus disorder prediction 669 688 - -
Mibi01g3095 1297 PANTHER SERINE/THREONINE-PROTEIN KINASE 567 1268 - -
Mibi01g3095 1297 MobiDBLite consensus disorder prediction 527 559 - -
Mibi01g3095 1297 MobiDBLite consensus disorder prediction 669 683 - -
Mibi01g3095 1297 MobiDBLite consensus disorder prediction 9 33 - -
Mibi01g3095 1297 MobiDBLite consensus disorder prediction 113 136 - -
Mibi01g3095 1297 MobiDBLite consensus disorder prediction 83 102 - -
Mibi01g3095 1297 SMART serkin_6 884 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g3095 1297 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1003 1015 IPR008271 GO:0004672|GO:0006468
Mibi01g3095 1297 FunFam probable serine/threonine protein kinase IREH1 882 971 - -
Mibi01g3095 1297 Gene3D Transferase(Phosphotransferase) domain 1 968 1191 - -
Mibi01g3095 1297 MobiDBLite consensus disorder prediction 447 477 - -
Mibi01g3095 1297 MobiDBLite consensus disorder prediction 1216 1242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3095 Mibi-ChrMibi01 54780226 54790791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3095 115 1291 AGC Kinase Gene Family AT3G17850 69.598 0.0 1621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Mibi01g3095 Pkinase 4.8e-66 CL0016