Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3094 ATGGTGAGGCTAGATAGGGCAGCAACAAATAAGAGCTTAGAGAGTTTATTGGAGTTGAACAAGATCGATATGACGACAGCGACGGTGAAGAAGGAACTGAGAGCCCAGAAGTCAATTCCTGGGCATGGCTTGGAGTTCAATAATTTGTCATATAGTGTGGTGAAGAAGGTGAAGAAAGATGGGGCATGGGTGAAGAAAGAGGCTTATCTTCTTCATGATATATCTGGTCAAGCCATGAGAGGTGAAGTAATGGCCATCATGGGGCCGAGTGGTGCTGGTAAGTCCACTTTTCTTGATGCTTTGGCTGGTCGAATTGCTCAAGGCAGCTTGGAAGGATCTGTTAGAATTGATGGAAAACCAGTGACAACAAGTTACATGAAGATGGTGTCGTCTTATGTAATGCAAGATGACCAATTGTTTCCTATGTTGACTGTTTTTGAGACATTTATGTTCGCAGCTGAGGTCAGGCTTCCTCCTTCTATTTCTAGAGAGGAAAAGAAGAAAAGGGTCTATGAGCTCCTTGATCAGCTTGGCTTGCAGAGTGCAACACATACATATATTGGAGATGAGGGGAATAGAGGGGTCTCAGGAGGAGAAAGACGAAGGGTATCAATCGGCGTAGACATAATCCATAAGCCATCACTTTTGTTTCTTGATGAACCAACCTCAGGTCTTGATTCCACAAGTGCTTATAGTGTGGTTGAAAAGGTGAAGGACATTGCTCGAGCTGGAAGCATCATCCTCATGACCATTCATCAACCTTCCTACAGAATTCAAATGCTCCTAGACCGTCTCACCATCCTCGCAAGGGGAAGATTGATATATATGGGAAAGCCAAGTGCAGTTCCATCTCATCTTTCTGGGTTTGGAAGACCAGTACCTGATGGAGAAAACAGTCTAGAGTATCTTTTAGATGTCATTAAAGAATACGACGAATCCATTGTTGGACTTGACCCACTTGTTTTCTATAATCGTGACGGCCTCAAACCAGACCAATTAGCCAAGACCCCACTTGTTAAAACCCCAAGAACAATATACAAAAAGACCAACAACATCATTAACACACCTGCTTCAAAACACATGATCAGCCTCAAATCTCAAGGCTTCAAACCTGGAACAACACCGACACAGTTTCCACCTGATTCTACACAATTCAGCTATAACATCCATGATGATCACGATGAGGACGAGGACGAGGATTTCGATAAGTCCCTTGAGAGAAAAAGTACTATTCACACCCCTAGGGTTATTAATACAACCATGACTAGTGGTGTGTATCCTCGTTTGGCTTCTCAGTTTTACAAGGATTTCTCAGCTAAAGATTTCTCTGTTTGGCTTTACCACGGCGTTGTTGGAACACCTCGCCGCCCGTCTTGGACTCCGGCGAGGACACCGGGTTGGACACCGGCGAGAACCCCGATGTCTGGACCTAGAAGCACCATTTTCAACAACCATTATTCGACATCATATGAAGAGCAACCATATCATCATCATGCAAAAACAACACCATCAATTGTTAGCCAATCCGTTGCCTTGGACTCATATATAAGTTCATATGAGGAATTTGACATTGAAGTTCTTGATGAGCCAAACATTGGACCAAAGTATGCTAATCCATGGCTACGTGAGGTCTTTGTGCTTTCATGGAGGACAACTCTAAATGTGATTAGAACTCCAGAATTGTTCCTTTCTCGTGAGATTGTTTTAACTGTTATGGCTCTTGTCCTCTCCACAATCTTCAAAAACCTAAGTCACTCAACTTTCGAGGACATTAACAGAATCCTCAACTTCTACATCTTCTCTGTTTGCCTTGTCTTCTTCTCCTCAAACGACGCCGTTCCATCCTTCATCTTAGAGAGATTCATCTTCATAAGAGAAACCTCACACAATGCTTATCGTGCTTCTTCATATGTGATCTCCTCCCTCATAGTTTATCTCCCATTTTTTGCAATCCAAGGCCTCACTTTCGCCATCATTACCAAGTACATGCTTCAACTCAAAAGTAGCCTCTTGTACTTTTGGTTGATCCTCTATGCCTCCCTCATAACCACCAATGGTTATGTCATGATGGTTAGCGCTCTAGTTCCTAGTTACATCACAGGATACGCCGTGGTCATAGCCACCACGGCGTTATTCTTCCTTACATGTGGCTTTTTCCTTAAGAGAACTCAAATTCCTCCTTATTGGAAATGGCTTCACTATGTTTCTGCCATAAAGTACCCATTTGAGGCATTGTTGACTAATGAGTTTAAGAGTGAACGTTGTTACACTGGGAGCCTTTCGGATTTGTCTCCTGGTCCTATGGGAGATGTGAAGCTTAGTAAAGGAGATCATAACAGGACGAATTGTCCAATTGGAGAAGGTTTGTTTGGAGAAGATGTTTTGGCCACCATGGATATTCAGATTGAGAAGATTTGGTTTGATATAGTCATACTTCTTGCTTGGGGTGTTCTTTATAGGTTCTTCTTCTATTTGGTTTTGAGATTTTATTCTAAGAATGAGAGGAAGTAA 2511 0.4257 MVRLDRAATNKSLESLLELNKIDMTTATVKKELRAQKSIPGHGLEFNNLSYSVVKKVKKDGAWVKKEAYLLHDISGQAMRGEVMAIMGPSGAGKSTFLDALAGRIAQGSLEGSVRIDGKPVTTSYMKMVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISREEKKKRVYELLDQLGLQSATHTYIGDEGNRGVSGGERRRVSIGVDIIHKPSLLFLDEPTSGLDSTSAYSVVEKVKDIARAGSIILMTIHQPSYRIQMLLDRLTILARGRLIYMGKPSAVPSHLSGFGRPVPDGENSLEYLLDVIKEYDESIVGLDPLVFYNRDGLKPDQLAKTPLVKTPRTIYKKTNNIINTPASKHMISLKSQGFKPGTTPTQFPPDSTQFSYNIHDDHDEDEDEDFDKSLERKSTIHTPRVINTTMTSGVYPRLASQFYKDFSAKDFSVWLYHGVVGTPRRPSWTPARTPGWTPARTPMSGPRSTIFNNHYSTSYEEQPYHHHAKTTPSIVSQSVALDSYISSYEEFDIEVLDEPNIGPKYANPWLREVFVLSWRTTLNVIRTPELFLSREIVLTVMALVLSTIFKNLSHSTFEDINRILNFYIFSVCLVFFSSNDAVPSFILERFIFIRETSHNAYRASSYVISSLIVYLPFFAIQGLTFAIITKYMLQLKSSLLYFWLILYASLITTNGYVMMVSALVPSYITGYAVVIATTALFFLTCGFFLKRTQIPPYWKWLHYVSAIKYPFEALLTNEFKSERCYTGSLSDLSPGPMGDVKLSKGDHNRTNCPIGEGLFGEDVLATMDIQIEKIWFDIVILLAWGVLYRFFFYLVLRFYSKNERK 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3094 836 Pfam ABC transporter 71 223 IPR003439 GO:0005524
Mibi01g3094 836 FunFam ABC transporter G family member 6 59 286 - -
Mibi01g3094 836 Pfam ABC-2 type transporter 543 750 IPR013525 GO:0016020|GO:0140359
Mibi01g3094 836 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 285 IPR027417 -
Mibi01g3094 836 ProSitePatterns ABC transporters family signature. 195 209 IPR017871 GO:0005524|GO:0016887
Mibi01g3094 836 CDD ABCG_EPDR 44 277 - -
Mibi01g3094 836 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 28 823 - -
Mibi01g3094 836 Gene3D - 43 287 IPR027417 -
Mibi01g3094 836 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 44 295 IPR003439 GO:0005524
Mibi01g3094 836 SMART AAA_5 80 280 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3094 Mibi-ChrMibi01 54762540 54767209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3094 81 277 Calmodulin-binding Proteins AT2G36910 25.500 7.56e-08 54.3