Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3084 ATGTGTGGAGGTGCCATCATCTCCGACTTCGTCCCTCCCAAGCTTGCTGGTCGCAAATCCACCACCCATGATTTCTGTTCTGAACTCGACGCCTTTGCTGACCTCTTAGGATTTGATCCTTCTTCTCTTTCAGCTGCTTCCCAACACCACAATGATCACAATCTCTCTCCCATTCCACCTACTACCCCAGTGACATGTGAGAATAATAGCAACAAAAATGACAATAACAACAAGAAGAAGAAGCCTGAGAAGAAAAACGGAGGAAGGCCTCGCAAGAATATTTACAGAGGAATCCGGCAAAGGCCATGGGGCAAGTGGGCCGCCGAGATAAGGGACCCACACAAGGGCGTCCGTGTCTGGCTCGGCACCTTCAACACCGCCGAGGAAGCCGCCAGAGCCTACGACCAAGCCGCCAAGCGCATCCGTGGTGACAAAGCCAAACTCAACTTCCCCTCAGCTCCGGCTCAGGCCCAAGCCCAGGCCCAGACTCCAGCTAAGGCCCAAGGTCAGGCCCAAACTCAGGCTCAGGCTCAGGCTCAGGCTGCTACCCTGGAACCGCCTCAGAAGAAGCAGTGCCTCATCCAGGGCCAAAACCAAGCTTTCCACCTCAATCAACAGCAAATCTCATCCCTTGAATCCTTCTTTGGTCTGGATGATGACGACGACAACAAGAACAACACCACTGATGATGTTTCTTCGCAGCCGATTGGAGCAGCCATTGGCAACGGCAGGGGCTTATTCTCTGAGTGGGACCCCATGGATGATCTTTGGATGCTGAACGACGTCGTTATGCATCACCTGACTCATAACGGTCACTTCTAG 822 0.5316 MCGGAIISDFVPPKLAGRKSTTHDFCSELDAFADLLGFDPSSLSAASQHHNDHNLSPIPPTTPVTCENNSNKNDNNNKKKKPEKKNGGRPRKNIYRGIRQRPWGKWAAEIRDPHKGVRVWLGTFNTAEEAARAYDQAAKRIRGDKAKLNFPSAPAQAQAQAQTPAKAQGQAQTQAQAQAQAATLEPPQKKQCLIQGQNQAFHLNQQQISSLESFFGLDDDDDNKNNTTDDVSSQPIGAAIGNGRGLFSEWDPMDDLWMLNDVVMHHLTHNGHF 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3084 273 Gene3D AP2/ERF domain 94 152 IPR036955 GO:0003700|GO:0006355
Mibi01g3084 273 ProSiteProfiles AP2/ERF domain profile. 94 151 IPR001471 GO:0003700|GO:0006355
Mibi01g3084 273 MobiDBLite consensus disorder prediction 44 95 - -
Mibi01g3084 273 PANTHER DNA-BINDING DOMAIN 56 187 IPR044808 GO:0003700|GO:0009873
Mibi01g3084 273 SUPERFAMILY DNA-binding domain 94 151 IPR016177 GO:0003677
Mibi01g3084 273 Pfam AP2 domain 95 143 IPR001471 GO:0003700|GO:0006355
Mibi01g3084 273 PRINTS Ethylene responsive element binding protein signature 117 133 IPR001471 GO:0003700|GO:0006355
Mibi01g3084 273 PRINTS Ethylene responsive element binding protein signature 95 106 IPR001471 GO:0003700|GO:0006355
Mibi01g3084 273 MobiDBLite consensus disorder prediction 44 72 - -
Mibi01g3084 273 FunFam Ethylene-responsive transcription factor 2 93 152 - -
Mibi01g3084 273 MobiDBLite consensus disorder prediction 153 182 - -
Mibi01g3084 273 SMART rav1_2 94 157 IPR001471 GO:0003700|GO:0006355
Mibi01g3084 273 MobiDBLite consensus disorder prediction 151 182 - -
Mibi01g3084 273 CDD AP2 94 151 IPR001471 GO:0003700|GO:0006355
Mibi01g3084 273 MobiDBLite consensus disorder prediction 215 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3084 Mibi-ChrMibi01 54660119 54662032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3084 1 266 AP2-EREBP Transcription Factor Family AT3G16770 40.206 1.55e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi01g3084 AP2 5.1e-15 CL0081