Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3076 ATGCCGGTGAGTTTTCAATTTTCTGAAGTTGCTTTTTTTTTTTTTTCCCTGTGTTTTAGGACGATGGGTTCATCAAACATTAGGGACGTTTTAACAGCGTTTAGTCCTTCTAACGACTTGTTTGCTATCAGCGTTGGAGATGGTCGCATAAAGATATGGGATACAATAAATGGTCAAATCCAGACGGAGTTTGCGGACATCACATCAAATGATGCAACAAGTATATATGCAGGATCAATAAAGGGCCATCTTTCAATAGATTATACATGCATGAAGTGGTTGTCATTAGAAAGAAAGAAAAAAAGGAAGCACACATCCTCATTGTTAGTACTTGGGACAGGCAGTGGTGATGTGTTGGCACTTGATGTTTCTGCTGGTCAATTAAATTGGAGAATTGATGACTGCCATCCTGGAGGCGTGAAAGCTGTTTCATCTTCAGCAAATGGATCATTTGTTTATACTGCAGGTGCAGATGGAATGGTTTGCAAGATTGATTGCAAGACAGGAAACCTGTTGGAAAAATTCAAAGCTTCCACCAAAGCAGTATCCTGTCTCTCTGTTTCTTCAGATGGGGAAACAATAGCTACTGCTGCAGCACAACTAAAGATTTTTAATTCTTCCGATCACAAAAAGATACGGAAGTTCTTTGGCCATCCTGGATCTGTTCGGTGTCTTGTCTTCTCTGAAGATGGGGAGTATATTCTATCTTCTGCTGTTGGTGAAAGATATATTGCTGTCTGGAGGATTGATGAGGCCAAAAAGAAGTCAGCCTGTTGCATTCTTGCAATGGAGCATCCTGCTGTTTTTCTTGATAGCAGGTGCACCCCTAGCAGGGAGCTTGACAATGTTGGTGTATGCATTTTGGCTATCTCAGAAGTTGGTGATTGTTATGTTTGGTTTGGAAATAGAATTGAGGAACTACGCAATGTGAAGCCCACTAAAATATCTTTATCTTTGGAAGACATATCTTCTAGAAATCACAAGGGTGCATTACCAGCAGTATATGCTGCAAAGTTAGAAAGCGTTAACAATCCTACCTCTGGGCAGATTTTACTTGTTCATGGGATGCTTGTAAAGCCATCATTTCAAAAAATTTCAGTGCAATCTGGCTCAGACATAAAGTTGAATTTCTCTGATGATGGTGTTCTTCTTCGGCTGAACAAGTCCCTCGTAAAGTATAAGAAGGCAAAAGATGTTAAAAAAGTTACTGCACTAGACCGTGCTAATGCGGAGGATGCCTTGCTCCCAATTCCTAAGCTTTTTGATTCACACGTGCGAGAGAAAGAATTTCAAGACTCTTCAGGCGTGGAGGTTATGGATGGTTTGGGTAGAAGTAGTGAATCTGTTTCTATGGATATTGAAGATGAGATGGCCCAAGGCGAGACTGATGTGATCTGCATGGAGGATCAGATGAGATCCCTTGGGATCCTTGATGATGAAAATGATATTGAATCAGATATCAAATTTCGTTTTTCATTGTTGAAGGGTGTTGATCTTGAAGCTAGTCTTCCAATGAGAAAGATAAGAGCAACTGTCTTGACTATGGGACCATCTGAAGCATATAAGCTCCTGGAAGTTTTGCTGACTGTTTGGCAATCAAGGTCATCTAGTGGCAAGTACGCACTTCCGTGGATATATAGCATACTGGTGATTCATGGTCATTACTTAATTTCTCATGAAAATTTATCACATGTGCTTGATTCCTTGATCAAGATGGCTGGCTCTAGAGGATCTGCACTTGAGACTTTGTTACAATTATCAGGTCGTTTGCAATTGGTGACAACACAGATTAACAAAGCTTCTAAAATTACAACTCATTCAGTGAGAGATCATCCAATGGATGAAAGCGAAGATGAGGACAAAGAGGATTATTTTGAAGAGGAAGGAGATGATGCTTCTGAAATAAGTAGCGATGATGATGATGACAGCTAG 1932 0.4022 MPVSFQFSEVAFFFFSLCFRTMGSSNIRDVLTAFSPSNDLFAISVGDGRIKIWDTINGQIQTEFADITSNDATSIYAGSIKGHLSIDYTCMKWLSLERKKKRKHTSSLLVLGTGSGDVLALDVSAGQLNWRIDDCHPGGVKAVSSSANGSFVYTAGADGMVCKIDCKTGNLLEKFKASTKAVSCLSVSSDGETIATAAAQLKIFNSSDHKKIRKFFGHPGSVRCLVFSEDGEYILSSAVGERYIAVWRIDEAKKKSACCILAMEHPAVFLDSRCTPSRELDNVGVCILAISEVGDCYVWFGNRIEELRNVKPTKISLSLEDISSRNHKGALPAVYAAKLESVNNPTSGQILLVHGMLVKPSFQKISVQSGSDIKLNFSDDGVLLRLNKSLVKYKKAKDVKKVTALDRANAEDALLPIPKLFDSHVREKEFQDSSGVEVMDGLGRSSESVSMDIEDEMAQGETDVICMEDQMRSLGILDDENDIESDIKFRFSLLKGVDLEASLPMRKIRATVLTMGPSEAYKLLEVLLTVWQSRSSSGKYALPWIYSILVIHGHYLISHENLSHVLDSLIKMAGSRGSALETLLQLSGRLQLVTTQINKASKITTHSVRDHPMDESEDEDKEDYFEEEGDDASEISSDDDDDS 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3076 643 PANTHER OS03G0300300 PROTEIN 22 641 - -
Mibi01g3076 643 Pfam Dip2/Utp12 Family 504 594 IPR007148 -
Mibi01g3076 643 ProSiteProfiles Trp-Asp (WD) repeats profile. 215 257 IPR001680 GO:0005515
Mibi01g3076 643 MobiDBLite consensus disorder prediction 603 643 - -
Mibi01g3076 643 MobiDBLite consensus disorder prediction 616 643 - -
Mibi01g3076 643 Pfam WD domain, G-beta repeat 211 247 IPR001680 GO:0005515
Mibi01g3076 643 Pfam WD domain, G-beta repeat 24 54 IPR001680 GO:0005515
Mibi01g3076 643 SMART WD40_4 208 248 IPR001680 GO:0005515
Mibi01g3076 643 SMART WD40_4 125 165 IPR001680 GO:0005515
Mibi01g3076 643 SMART WD40_4 168 205 IPR001680 GO:0005515
Mibi01g3076 643 SMART WD40_4 15 54 IPR001680 GO:0005515
Mibi01g3076 643 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 33 253 IPR011047 -
Mibi01g3076 643 Gene3D - 24 327 IPR015943 GO:0005515
Mibi01g3076 643 ProSiteProfiles Trp-Asp (WD) repeats profile. 33 63 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3076 136 247 U-box Gene Family AT2G33340 27.586 8.57e-07 50.1