Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3072 ATGGAAGAGTCCTTAGAGTCCAACGCTGCTACAGAATCCAAACTGGCTGAATCGGACTTGATGGAAGAGTTCTCAGAGTCCGAAACTGCTACTGAATCCGACCCGGAAGACGAGGACTGGACACGAGAGTTCGAGACTGCCTGGACACTCAAGCTCGAGCTCGAATCAGACTGGGTACTTGAGTTCGAGCTCCAATCTGTCTGGGTGCTAGAGTTCGGCGCGGAAGACGTTGCTTCAAAACCTTCTCGCTCTGGATCCCAAGAGATCTCATCTGATCCTCCATGCAGATCACATCATCAGTCTCGCCTTGGGCCATCTCATCTGCACAGATTGATAAAATCAACATCCGAAGAAGAACACCATCATCAGAGAAATTCAATTTTATGTCTGCGCCAGATTGCACTGAAATTTTTTGAAATGATGGCTTTACAAGCATCCCATGAACAAGAAATGGTCAATGGTGGGGAAGTGAAGCACTGGATATGCGTCAATTTTTCCGAAGATGTTGAGAACGATGCTGCATGTGTATTTTGTGATGAACTTATTAAAGAGTGTCGTAAATATGGCATGGCATTCAACTCTAAGCCAGTACTTCCCCTGCACCGTACGCGTGCCGGTCCTGAGTCTGTGGATAAGGATCTGAAAACTAAGTATAATGAGGCAAAGGCCGAACTGGGGGAGGAGAATCTTGATATTCTGATTGTTATTTTGCCTGATAATAAAGGCTCTCTTTATGGTCATGTGAAACGAATATGTGAGACAGATCTTGGGGTTGTTTCTCAATGCTGTTTGACCAAGCACGTCTCTGAAAGGAAGAAGCCGTATCTTGCTAATGTTGCCTTGAAGATCAATGTAAAAGTAGGTGGAAGGAACACAGTGCTTGATGATGCACCACCTCTAGTCAGTGATCGACCAACAATTATTTTTGGCGCTGATGTTACTCATCCACATCCTGGGGAGGATTCTAGTCCCTCTATAGCAGCTGTTGTGGCCTCTCAAGGCTGGCCTCAAATCACAAAGTATGCTGGTTTGGTGTCTGCTCAAGATCCTCGGCAGGAGCTCATTCAAGACCTCTACAAAGAATGGCAAGATCCAGTAGAAGGAACAGTAACTGGTGGAATGATCAAGGATGGTGTGAGTGAGGGGCAGTTCAATCAAATTCTACTGTCTGAAGTCAATGCTATCCGCAACGCATGTGAATCCATAGAACCTAAGGATCATATTCCAATCACATTTGTGGTAGTTCAGAAGAGTGGAAACATATTGCCCGCTGCAAACATTGACAAACAACCTTTATATGCTAGGTGCACTCGTTCTGTTTCAATTGTGCCGCCTGCATATTATGCTCATTTGGCTGCCTCCCGAGCTCGACTTTATATAGAACCAGAGACTTCAGAGAGTGGGTCCATGACCAGTGGTGGTGGTGCTGCTGCAAGTGGAGTAGGCGGAGCAGGGCGGAGCTCTCAACCACCGGGCGGCAGCGGCGCAGTTAGGCCTCTTCGTGCTCTTAAGGACAATGTCAAGAGGGTTATGTTCTACTGTTGA 1545 0.466 MEESLESNAATESKLAESDLMEEFSESETATESDPEDEDWTREFETAWTLKLELESDWVLEFELQSVWVLEFGAEDVASKPSRSGSQEISSDPPCRSHHQSRLGPSHLHRLIKSTSEEEHHHQRNSILCLRQIALKFFEMMALQASHEQEMVNGGEVKHWICVNFSEDVENDAACVFCDELIKECRKYGMAFNSKPVLPLHRTRAGPESVDKDLKTKYNEAKAELGEENLDILIVILPDNKGSLYGHVKRICETDLGVVSQCCLTKHVSERKKPYLANVALKINVKVGGRNTVLDDAPPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQGWPQITKYAGLVSAQDPRQELIQDLYKEWQDPVEGTVTGGMIKDGVSEGQFNQILLSEVNAIRNACESIEPKDHIPITFVVVQKSGNILPAANIDKQPLYARCTRSVSIVPPAYYAHLAASRARLYIEPETSESGSMTSGGGAAASGVGGAGRSSQPPGGSGAVRPLRALKDNVKRVMFYC 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3072 514 MobiDBLite consensus disorder prediction 1 40 - -
Mibi01g3072 514 Gene3D - 298 426 IPR036397 GO:0003676
Mibi01g3072 514 Gene3D - 430 514 IPR036397 GO:0003676
Mibi01g3072 514 SMART Piwi_a_2 232 461 IPR003165 GO:0003676
Mibi01g3072 514 MobiDBLite consensus disorder prediction 464 499 - -
Mibi01g3072 514 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 432 462 - -
Mibi01g3072 514 MobiDBLite consensus disorder prediction 79 104 - -
Mibi01g3072 514 Gene3D - 148 297 - -
Mibi01g3072 514 SUPERFAMILY Ribonuclease H-like 218 461 IPR012337 -
Mibi01g3072 514 ProSiteProfiles Piwi domain profile. 232 420 IPR003165 GO:0003676
Mibi01g3072 514 MobiDBLite consensus disorder prediction 22 40 - -
Mibi01g3072 514 Pfam Piwi domain 233 420 IPR003165 GO:0003676
Mibi01g3072 514 MobiDBLite consensus disorder prediction 80 97 - -
Mibi01g3072 514 FunFam Argonaute 10 142 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3072 Mibi-ChrMibi01 54470837 54476890 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3072 119 514 Eukaryotic Initiation Factors Gene Family AT1G48410 53.783 2.12e-154 466