Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3070 ATGGCAAGCGATTGGAGAGCTGAAGCACCTAGTAGATGTTATGGTAGGGCTCGGGGTGGTCGTGGTCGTCGGATACTTCAACAGCACTATGGTGATCCCCCTGAATACCAGAGAACGCAAGGAGGTTATGGTGATCCCCCTGAATACCGAAGAAGGGCAGGTTCTTGTAGAGGTTATGGTAGGGGTAGGGGTAGGGGTCGTGGTCGTGGGATGCCCCAACAGGAGTTAGGTGGTAGGGGCAATTATGGCAGTGACGCTGTTCCACATCATGCAATGTCTGATGAGGCCAGTTCTTCTTCCCATGGCCAACGCTCTAAGCTCTCACAACAAATGGGGCAGATCACCATTCATTCACATTCTGTTTCTCCCTCCATTGATTCATTGGACAGGCCCCGCAGGCCTGGAACGGGTACCAGTGGCAAAAAGTGTATAGTTAAGGCTAACCACTTCCGCGCACAGTTAATTCGCACAGATTTAGAGTTGCACCACTACGATGTCACCATCACTCCAGAAGTGACATCAAGGGGTCTCAACCGTGCTGTCATGGCACAGCTGGTGAGGCAATATCAACTGGGTGGGAAACTTCCAGCATATGACGGGCGTAAGAACATCTATACTGCGGGTCCTCTTCCTTTCAATTCAGAGGAGTTCGAAATAATTCTTCTTGATAGAGATGATGGATCAGGAAGGCCAATAAGAGAGAGGCGGTTCACTGTTGGGATAAAATGGGCTGCTCAGGTAGATCTACATCATTTAGAACCCTTCCTGCAGGGAAAGCAGACCGATGCTCCTCAAGAAGCTCTTCAGGCTCTTGACATCGTGCTGCGTGAATTACCTAGCTCTAGGTACTTGGACAGTGGATATGTTTTGAGTATTCGTCCTACTGAGATGGGATTATCTCTCAACCTCGATATGTCCTCAACGGCATTTATTCGGCCATTGCCCGTAATAGACTTTGTTTCTGAGTTGCTTGGACGGAATGTCTCCTCCCGCCCATTTTTGTCTGACGCAGATCGCTTAGAGATAAAGAAAGCTCTTCGGGGTGTCAAAGTTGAAGTGACACACCGTGGAACCATAAGGAGAAAATACCGCATCTCTGGTGTGACTCCAAAGGCAACCCGAGAGCTGGAGTTTCCCACTGATGAGAGTGGAACAATAATGAAGAATGTTGTTGATTACTTTTTGGAGACATATGGATTTGACATTCAACATACTCAATTGCCTTGCTTGGAAGCGGGCAATGCGCAGAGGCGACCAATCTACTTACCAATGGAGGCTTGTAAGATTGTAGAAGGTCAAAGGTACTCAAAGAGGCTGGATAAAAAGCAGGTTGATGCTTTGCTAGAAGTCACACGCCAGCCTCCTTGGAAAAGGGAGGAAGGCATAGTGAAGATAGTTGGTGATAATGCTTACTGTAAAGACCCTTATGCTATAGAGTTTGGGATTGAAATCAGTAAAGAGCTAGCTCAAGTTAATGCTCGCATCCTTCCTGCGCCTCGGAAAATGGTCAATGCTGGGACAGTCCATCACTGGATATGCATCAATTTTTCAGATACTGAAGATGAGAAAGCGCGTAACTTTTGTGGTGCACTTGCTGATATGTGTCGTGATGTGAAACGAATATGTGAGACAGATCTTGGGGTCGTTTCTCAATGCTGTTTGACCAAGCATGTCTCTGAAAGGAAGACGCCGTATCTTGCTAATGTTGCCTTGAAGATCAATGTAAAAGTAGGTGGAAGGAACACAGTGCTTGATGATGCACCACCTCTAGTCAGTGATCGACCAACAATTATTTTTGGCGCTGATGTTACTCATCCACATCCTGGGGAGGATTCTAGTCCCTCTATAGCAGCTGTTGTGGCCTCTCAAGATTGGCCTCAAATCACAAAGTATGCTGCTTTGGTGTCTGCTCAAGATCCTCGGCAGGAGCTCATTCAAGACCTCTACAAAAAATGGGAAGATCCAGTAGAGGGACCAGTGACTGGTGGAATGATCAAGGAGCTTCTTTTATCTTTCCGGGACAACAATGATGGGCTGATGCCGGAGCGCATTATATTTTACAGGGATGGTGTGAGTGAGGGGCAGTTCAATCAAGTTCTACTGTCTGAAGTCAGAGCTATCCGCAAGGCATATGAATCCTTAGAACCCAACAATCATATTCCAATCACATTTGTGGTGGTTCAGAAGCGCCATCATACGAGGCTGTTTGCCGACAATTATCGTGACTGGAGATATGTTGACAACAAGAGTAAAAACATATTGCCCGCCATGCTGGGATCCAGATATGCTAGATGCACTCGTTCTGTTTCAATTGTGCCGCCTGCATATTATGCTCATTTGGCTGCCTCCCGAGCTCGACTTTATATAGAACCAGAGACTTCAGAGAGTGGGTCCATGACCAGTGGTGCTGCTGCTGCACCTGGAGTTGGCGGAGCAGGGCGGAGCTCTCAACCACCGGGCGGCAGCGGCGCAGTTAGGCCTCTTCGTGCTCTTAAGGACAATGTCAAGAGGGTTATGTTCTACTGTTGA 2529 0.4761 MASDWRAEAPSRCYGRARGGRGRRILQQHYGDPPEYQRTQGGYGDPPEYRRRAGSCRGYGRGRGRGRGRGMPQQELGGRGNYGSDAVPHHAMSDEASSSSHGQRSKLSQQMGQITIHSHSVSPSIDSLDRPRRPGTGTSGKKCIVKANHFRAQLIRTDLELHHYDVTITPEVTSRGLNRAVMAQLVRQYQLGGKLPAYDGRKNIYTAGPLPFNSEEFEIILLDRDDGSGRPIRERRFTVGIKWAAQVDLHHLEPFLQGKQTDAPQEALQALDIVLRELPSSRYLDSGYVLSIRPTEMGLSLNLDMSSTAFIRPLPVIDFVSELLGRNVSSRPFLSDADRLEIKKALRGVKVEVTHRGTIRRKYRISGVTPKATRELEFPTDESGTIMKNVVDYFLETYGFDIQHTQLPCLEAGNAQRRPIYLPMEACKIVEGQRYSKRLDKKQVDALLEVTRQPPWKREEGIVKIVGDNAYCKDPYAIEFGIEISKELAQVNARILPAPRKMVNAGTVHHWICINFSDTEDEKARNFCGALADMCRDVKRICETDLGVVSQCCLTKHVSERKTPYLANVALKINVKVGGRNTVLDDAPPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPQITKYAALVSAQDPRQELIQDLYKKWEDPVEGPVTGGMIKELLLSFRDNNDGLMPERIIFYRDGVSEGQFNQVLLSEVRAIRKAYESLEPNNHIPITFVVVQKRHHTRLFADNYRDWRYVDNKSKNILPAMLGSRYARCTRSVSIVPPAYYAHLAASRARLYIEPETSESGSMTSGAAAAPGVGGAGRSSQPPGGSGAVRPLRALKDNVKRVMFYC 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3070 842 MobiDBLite consensus disorder prediction 1 141 - -
Mibi01g3070 842 CDD PAZ_argonaute_like 313 430 - -
Mibi01g3070 842 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 124 537 - -
Mibi01g3070 842 MobiDBLite consensus disorder prediction 93 125 - -
Mibi01g3070 842 SUPERFAMILY PAZ domain 144 465 IPR036085 GO:0005515
Mibi01g3070 842 Gene3D - 588 759 IPR036397 GO:0003676
Mibi01g3070 842 Gene3D - 760 842 IPR036397 GO:0003676
Mibi01g3070 842 Pfam N-terminal domain of argonaute 141 275 IPR032474 -
Mibi01g3070 842 SMART PAZ_2_a_3 318 456 IPR003100 GO:0005515
Mibi01g3070 842 SMART Piwi_a_2 526 790 IPR003165 GO:0003676
Mibi01g3070 842 SUPERFAMILY Ribonuclease H-like 532 790 IPR012337 -
Mibi01g3070 842 Pfam PAZ domain 338 444 IPR003100 GO:0005515
Mibi01g3070 842 Pfam Argonaute linker 1 domain 287 312 IPR014811 -
Mibi01g3070 842 FunFam Protein argonaute-2 307 436 - -
Mibi01g3070 842 Pfam Argonaute linker 2 domain 458 500 IPR032472 -
Mibi01g3070 842 Pfam Piwi domain 535 755 IPR003165 GO:0003676
Mibi01g3070 842 ProSiteProfiles PAZ domain profile. 314 431 IPR003100 GO:0005515
Mibi01g3070 842 MobiDBLite consensus disorder prediction 794 827 - -
Mibi01g3070 842 Gene3D - 533 587 - -
Mibi01g3070 842 ProSiteProfiles Piwi domain profile. 537 749 IPR003165 GO:0003676
Mibi01g3070 842 Gene3D paz domain 307 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3070 Mibi-ChrMibi01 54448099 54454349 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3070 86 842 Eukaryotic Initiation Factors Gene Family AT1G48410 55.209 0.0 882