Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3063 ATGGGAGTGAAGGGTCTCTGGGAACTTCTTTCCCCCGTCGGTCGCCGCGTCTCCGTCGAGACCCTCGCCGGCAAAAAGCTAGCCATTGGTACCTTTTCTTCTTTCCCCTTTTTCTCTCTTTTCAATCCCTATCTATCTTTTCGATCACAAAAAAACAATATCACTTGGGCATGTCAATTTTCAATTTTCTCAGATGCGAGCATATGGATGGTTCAGTTTATGAAGGCGATGCGTGATGAAAAGGGAGAGATGGTTCATAATGCTCATTTGCTTGGCTTCTTTCGCCGAATTTGCAAGCTCTTGTTCCTTCGGACTAAGCCTGTTTTTGTCTTTGATGGTGGCACGCCTGTTCTTAAGCGACGCACTGTTATTGCGCGTCGGAGACAGCGGGAAAATGCTCAGGCTAAAGTTCGAAAGACTGCCGAGAAATTGCTTCTCAATCATTTAAAGGCGTTGAAGTTGAAAAAACTTTCAGATGATGTTAAAAACCAGAGGCTGAAGCAGAAGAGTAAATCCAAGGGTCAGAAAAAATCAGATCAGGTGGACTTGATCAGCCGTGATTTAGGAACAAACAAGGCAAAAGAGAAAGATGAAATATGTGGAGCTGAGATGGACAAGAATATATCCAAGACAACTGTATCTTCAAGTTGCAATCAGGAGGATATTGATGCAATGTTGGCGGCATCTATTGTTGCAGAGGAAGATGGATTATTAGCTGCCAAAGCACCATCTGGTTCAGTTAGTCTCGCTGAGGATGAAGGCGATGCTGATCCAGGAATAATATTGCCAACGTTAGGTGCTGAAGTTGATCTATCTGTGTTAGCTGCTTTACCTCAGTCGATGCAACTTGACATTCTCTCGCAGCTTAAAGGGAAAAAAGTAGAAGGACTGCCGAAGGATTCTAACAACCAGAAACAATTTGAGGTCAATGAAAAGGACAGGGGCAAGGATAAGGGAATTCTGTCGCATGAAATCAACACAGTAGGATGTAGCTCAAGCAGTGATAATGTGGTGGCAAAGAAATACAATCAGGACAAAGTGGATGAAATGTTGGCTGCTTCTATTTTGGCTGAGGAAAATGAAAAGTTAGTAAACAGTGCATCGACATCTGGCAGGGATTTCATCTCTGCGGAAGAGGATTTCATTAGTGATGAAGATGAAGAAATGATCTTGCCAGCAATGCATGGGAAGGTTGATCCAGCTGTTCTAGCCTCTTTGCCTCCATCAATGCAACTTGACCTTCTTGGTCAGATGAGAGAGCGACTAATCGCAGAGAACAGACAGAAGTATCAGAAAGTCAAGAAGGATCCTGCAAAATTCTCTGAATTGCAAATACAGGCTTACCTTAAAACCGTTGCTTTCCGTCGGGAGATAAATGAAGTGCAGAAAGTTGCTTCAGGGGGAGTGGTAGGTGGTGTGCAGACTTCTCGTATTGCATCTGAAGCCAATAGAGAGTATATATTTTCAAGATCTTTTACTGGTGATAAGCAAGAACTTACTTCTACCAGCTTAGAAAAAAATAAAGGTACTCATCAGAAGACTTCAGGAAACCATTTTTCTCAGGGTTTTGTGAATAACAACGACCCTGCCAATGATTCTAGTACCTCAAGTGGATTGGTTTCTAATGAAGCTGGAAGTCCATCTGATGAGAATATCCAAACTTATCTGGATGAGAGGGGCCGATTTCGTGTTAGTAGACTTAGAGCCATGGGGATGCGTATGACCCGTGACATACAAAGAAATTTGGATCTGATGAAGGAGGTTGAGATGGAAAGAACAGTTGCAAATAAGGCCGAAAATAATAATGCAATTCTTAGTGGGGAGAAAAATGTTTTACTGAAATCTTCCAGCAACCTGCTTGTTGGTACGTCTGATGGGTCAAATGTTGACTTGATTGGAGATAATTCTAGAAATGAACATCCTGCATCAGCAGGGGATGCTTCTTTAGAGATATCCTTCATGGATGATGGTGTTAACAAGGGCCTCAATGATGATGATGATGATTTATTTGCTAGTTTAGTAGCAGGTAATCCAGGTGTACTTTCTTGTGCTGACAATAACTCATTGAAAGAACTAGATTCTGATTCTAGTACTGATTGTGACTGGGAAGAAGGAATTGTGGAAGGTAAAAGTGTTGTTAATGTGGGAATAAAACCATCTGTTTCAAAAAATAATTATAACGATGAGTCTGATGTAGAGTGGGAGGATGGAGTTTGTGATGATGCCAACACAACTTTGTGTGCAGCTGAGGCACAGAAAAAAACATCTCGAGGTTGCTTAGAGGAGGAGGCTGATTTACAGGAGGCAATACGGAGAAGTCTGGAGGTCACGGGGGAACACAAACTTAATTGCACATCATCCAGGCATGAGCACTCAGATGCTGACAATGACAAATCAGATTATGCATTGAACCAAGATGATAATTTGGTTGATTCTGGAGTGGAGAGCATTTGTGGCAATTTTGGAGTACCAAAGAGAGGCATCAGAATGGGTGAGTCCACTTTGCAAAGGGAGGGTAACACTGAACACAGAGAATCAAATTATAAAATTATAGATGACAAGATGGATGGCACAGCGAGAAGTAAAGAACAAGTTTCCCAGTCTCCTGAAGGACAGTCAGAACCATCTGTGGCATTTGATTCTGAGAAGACACCATCATTTATTAAGAAGCCTCATTCAATTGAGATGGTATCACATTCTGAAGATTTGTTTCACATTGCAGATGAAAGTAGGAGGAGTGAGATTCACCTGGCTGCAGAGCAACTCTTGGGTACCTTAAATGAAGATGGCAAGGTGTTTACCAATGGTCACAAATCTCCTGTAGCTGACTCCCTTGGTGTTTCAAAAGAGGATAAAAAGAACTGCAATTATGAAGCTGAACCTTCTGGTAATTATTCTGAGATACCTGAGCCTGTTGCTCCTTTTGTGGATTCCCCCTTGGAAGGGTTAACAGAAGGCCTTGACACTCAGCCAGAGTTGCCTAGAGAGGAGATCTACGGAAGCTTTGAGAAAAGGAGTAACCTTGGTAAAAATGCAATGGAGCCTTCAGGGTTTTTGTCTGCCGAAGACCTTGAAACTCAGTCAGAGTTGCCTACTGAGGATAACCATGGAAGCTTTGAGGAAAGTGAGAATAACCTTGTCAAAGATGAAATGAAAGCCCCAGGTCATTTGTTTACAGATTCAGTTGAGCATGGTTTGGAGGAAGAAATGCGTATTCTCGGTCAAGAATATGCCAACTTAGAATATGAACAAAGGAAGCTTGAACGCAATGCTGAATCTGTCAACAGTGAATTATTCACTGAATGTCAGGAATTGTTGCAAATGTTTGGCTTGCCATATATTATCGCTCCAATGGAAGCAGAAGCACAATGTGCTTATTTGGAACTTGAAAATCTGGTGGATGGTGTTGTGACTGATGACTCTGATGTCTTTTTATTTGGGGCACGTAGTGTCTACAAGAATATATTTGATGATCGCAAATATGTAGAGACATACTTCATGGAGGACATTGAGAAGGAGCTTGGATTGTCCAGAGAAAAATTAATCCGCATGGCTTTGCTTCTGGGGAGTGATTATACTGAAGGTGTAAGTGGGATCGGAATTGTAAATGCTATTGAGGTTGTAAACGCATTCCCTGAGGAAGATGGCCTTCAAAAATTCCGGCAGTGGGTTGAGTCACCCGATCCTACCATTTTTGGAAGGTTTGAAACAAAAAGCGGATCCAGCACCCAAAAGAAAGCGTCAAAAGTTGAAGAAAATGTTCCTGGCGCAAATTGCAATATAGATGAGACCATGATGGATCAAAACATTACGCATGCTCAGGAACATGGCTTATCAGATGACAGCCTAGAGATTAAGCAGATTTTTATGAATAAACATAGAAATGTGAGCAAGAATTGGCACATTCCTTCTTCTTTTCCAAGTGAAACAGTTATATCTGCCTACTCTTGCCCACAAGTGGATAGATCAACTGATCCATTTGCCTGGGGAAAGCCAGATCATCTTGTTCTCCGCAAATTGTGCTGGGAGAAGTTCGGTTGGACTAGTCAGAAATCAGATGAGTTGCTTTTACCTGTTTTAAGGGAATATAACAAAAATGAGACTCAACTGCGGTTGGAAGCATTTTATACTTTCAATGAAAGATTCGCAAAAATTCGCAGTAAGAGAATTAAGAAAGCAGTGAAAGGAATCACTGGCAATCACTCTTCAGATTTTACGGATGAGCCTGCTGAGGATTTGTCTAAGAGTAGGAAGAATGAGGCAGGAATTCCTGCTGAACTTAGGATTAGCAATTCAGAGATTTTCAAGGAAACAGGAGAAAGCCCTGCTGACATGAAGCCACTAAATTTGAAACAGTCAAGGAAAAGAAAAAATTCTGGAGATACTGTTGCTAAGACACTGACAAGGAAAAAGGGTAAATTGAATGCTCCTGCGTCAGCTTCTGGTCTGCTTGAGGTCGATGTGCAGAAAGGAGAACGGCAAACTCAGCCAAGTGATGGTAGTGGTTTGGTTCAGAACAGAAGTAGCAAAGGCAGGGGAAAAGGTGCAAGAGTTCAAAGAGGGAGGAGGAAGAGAAGCCTCGGTACTGATTCACTCAAAACTACATTTAGTGGTAGTGACAGTGATGACCAGGAGCCTGAAGTGCATGGTAAAAAATCAAGAGGGACAGATGAGGTCCGAAGGTCTCTGCGATCTCGGAAGATTGTCAACTATGCCATGGACAAAATTGAAATTGAAGATACTGTTGCCTCATCTAATCAGAGCAATAAGACAGACTTGAATGAAGAGCAGATAGATGAAATATTTACTGGGCTGCCAGGTGTATGTGGCAATGATGGCTCTAGTTTCAGCAGACATAAGGAAATCACAACAAATCTTTCTCCTACGAAAGATTTGCCTAGAAGCTATCTGGAATCTGGAGAGGGTTTCTGTACTGATGAAGAAAAAACTAGTCATGCAGAGGCGAGCAATTGCGATAGCTCTCGTGATCCCGGCTACCTGAAAGTGGGAGGCGGATTTTGCTTAGATGACGATGATAAAGGTAGCAAACATAATGAAATTTGTGATAATGACTACCTTAGAATGGGGGGTGGATTTTGCCTAGATGAGGATGAGACAGGTAGTAAACATAATGAAATTATTGACGATGCAGCAACTATAGTAGATGATAGTGCAGAACTCACTCGTGGTTCTACTGGTTTTGTGGATGAGGCTGAAGGTGATAAAAATATTACTTATCAATCAAGTTCAGTCAATAAAATATCTGGAATTGAACTGCAAGATAGAGGGAACACTAAACACAAGATAGAGATGAATTATGACTCTCTGAATACTAAAAGTAATTATGATCAGTCTGAGACTGACACTGGGGTTTGGATATCAGAGAATGCTCATGGCAATACTGAGAACGCGGCGACAGCATTTAGTGCAATGCCTTTTCTAAGAAAGAAAAGGAGGAAGAGCTGA 5466 0.4171 MGVKGLWELLSPVGRRVSVETLAGKKLAIGTFSSFPFFSLFNPYLSFRSQKNNITWACQFSIFSDASIWMVQFMKAMRDEKGEMVHNAHLLGFFRRICKLLFLRTKPVFVFDGGTPVLKRRTVIARRRQRENAQAKVRKTAEKLLLNHLKALKLKKLSDDVKNQRLKQKSKSKGQKKSDQVDLISRDLGTNKAKEKDEICGAEMDKNISKTTVSSSCNQEDIDAMLAASIVAEEDGLLAAKAPSGSVSLAEDEGDADPGIILPTLGAEVDLSVLAALPQSMQLDILSQLKGKKVEGLPKDSNNQKQFEVNEKDRGKDKGILSHEINTVGCSSSSDNVVAKKYNQDKVDEMLAASILAEENEKLVNSASTSGRDFISAEEDFISDEDEEMILPAMHGKVDPAVLASLPPSMQLDLLGQMRERLIAENRQKYQKVKKDPAKFSELQIQAYLKTVAFRREINEVQKVASGGVVGGVQTSRIASEANREYIFSRSFTGDKQELTSTSLEKNKGTHQKTSGNHFSQGFVNNNDPANDSSTSSGLVSNEAGSPSDENIQTYLDERGRFRVSRLRAMGMRMTRDIQRNLDLMKEVEMERTVANKAENNNAILSGEKNVLLKSSSNLLVGTSDGSNVDLIGDNSRNEHPASAGDASLEISFMDDGVNKGLNDDDDDLFASLVAGNPGVLSCADNNSLKELDSDSSTDCDWEEGIVEGKSVVNVGIKPSVSKNNYNDESDVEWEDGVCDDANTTLCAAEAQKKTSRGCLEEEADLQEAIRRSLEVTGEHKLNCTSSRHEHSDADNDKSDYALNQDDNLVDSGVESICGNFGVPKRGIRMGESTLQREGNTEHRESNYKIIDDKMDGTARSKEQVSQSPEGQSEPSVAFDSEKTPSFIKKPHSIEMVSHSEDLFHIADESRRSEIHLAAEQLLGTLNEDGKVFTNGHKSPVADSLGVSKEDKKNCNYEAEPSGNYSEIPEPVAPFVDSPLEGLTEGLDTQPELPREEIYGSFEKRSNLGKNAMEPSGFLSAEDLETQSELPTEDNHGSFEESENNLVKDEMKAPGHLFTDSVEHGLEEEMRILGQEYANLEYEQRKLERNAESVNSELFTECQELLQMFGLPYIIAPMEAEAQCAYLELENLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMEDIEKELGLSREKLIRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLQKFRQWVESPDPTIFGRFETKSGSSTQKKASKVEENVPGANCNIDETMMDQNITHAQEHGLSDDSLEIKQIFMNKHRNVSKNWHIPSSFPSETVISAYSCPQVDRSTDPFAWGKPDHLVLRKLCWEKFGWTSQKSDELLLPVLREYNKNETQLRLEAFYTFNERFAKIRSKRIKKAVKGITGNHSSDFTDEPAEDLSKSRKNEAGIPAELRISNSEIFKETGESPADMKPLNLKQSRKRKNSGDTVAKTLTRKKGKLNAPASASGLLEVDVQKGERQTQPSDGSGLVQNRSSKGRGKGARVQRGRRKRSLGTDSLKTTFSGSDSDDQEPEVHGKKSRGTDEVRRSLRSRKIVNYAMDKIEIEDTVASSNQSNKTDLNEEQIDEIFTGLPGVCGNDGSSFSRHKEITTNLSPTKDLPRSYLESGEGFCTDEEKTSHAEASNCDSSRDPGYLKVGGGFCLDDDDKGSKHNEICDNDYLRMGGGFCLDEDETGSKHNEIIDDAATIVDDSAELTRGSTGFVDEAEGDKNITYQSSSVNKISGIELQDRGNTKHKIEMNYDSLNTKSNYDQSETDTGVWISENAHGNTENAATAFSAMPFLRKKRRKS 1821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3063 1821 MobiDBLite consensus disorder prediction 861 880 - -
Mibi01g3063 1821 MobiDBLite consensus disorder prediction 504 553 - -
Mibi01g3063 1821 Pfam XPG N-terminal domain 65 132 IPR006085 GO:0004518
Mibi01g3063 1821 MobiDBLite consensus disorder prediction 1405 1422 - -
Mibi01g3063 1821 SUPERFAMILY PIN domain-like 3 1191 IPR029060 -
Mibi01g3063 1821 CDD PIN_XPG_RAD2 1093 1177 - -
Mibi01g3063 1821 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED 1 290 - -
Mibi01g3063 1821 Gene3D - 1046 1175 - -
Mibi01g3063 1821 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 1176 1384 IPR036279 -
Mibi01g3063 1821 MobiDBLite consensus disorder prediction 1449 1468 - -
Mibi01g3063 1821 SMART xpgn3 1 133 IPR006085 GO:0004518
Mibi01g3063 1821 MobiDBLite consensus disorder prediction 782 804 - -
Mibi01g3063 1821 SMART xpgineu 1107 1176 IPR006086 GO:0004518
Mibi01g3063 1821 FunFam DNA repair protein UVH3 1176 1233 - -
Mibi01g3063 1821 MobiDBLite consensus disorder prediction 1396 1561 - -
Mibi01g3063 1821 CDD H3TH_XPG 1179 1322 - -
Mibi01g3063 1821 Coils Coil 1070 1097 - -
Mibi01g3063 1821 MobiDBLite consensus disorder prediction 504 555 - -
Mibi01g3063 1821 SMART HhH_4 1178 1211 IPR008918 GO:0003677|GO:0003824
Mibi01g3063 1821 MobiDBLite consensus disorder prediction 1540 1561 - -
Mibi01g3063 1821 FunFam DNA repair protein UVH3 1057 1175 - -
Mibi01g3063 1821 CDD PIN_XPG_RAD2 2 127 - -
Mibi01g3063 1821 ProSitePatterns XPG protein signature 1. 105 119 IPR019974 GO:0016788
Mibi01g3063 1821 MobiDBLite consensus disorder prediction 831 883 - -
Mibi01g3063 1821 MobiDBLite consensus disorder prediction 836 860 - -
Mibi01g3063 1821 MobiDBLite consensus disorder prediction 162 187 - -
Mibi01g3063 1821 MobiDBLite consensus disorder prediction 1626 1661 - -
Mibi01g3063 1821 Pfam XPG I-region 1110 1191 IPR006086 GO:0004518
Mibi01g3063 1821 MobiDBLite consensus disorder prediction 1491 1508 - -
Mibi01g3063 1821 MobiDBLite consensus disorder prediction 1641 1656 - -
Mibi01g3063 1821 ProSitePatterns XPG protein signature 2. 1110 1124 IPR019974 GO:0016788
Mibi01g3063 1821 Gene3D - 1176 1235 - -
Mibi01g3063 1821 Gene3D - 1 186 - -
Mibi01g3063 1821 MobiDBLite consensus disorder prediction 295 315 - -
Mibi01g3063 1821 Pfam Ubiquitin binding region 398 422 IPR025527 -
Mibi01g3063 1821 Pfam Ubiquitin binding region 264 288 IPR025527 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3063 Mibi-ChrMibi01 54331572 54343613 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3063 62 135 Core DNA Replication Machinery Family AT5G26680 38.750 6.52e-07 52.0