Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3056 ATGGTGAGAGCGCCTTGCTGCGAGAAAGTGGGATTAAAGAAAGGAAGATGGACGGCTGAAGAAGATCAAATATTGACACAGTACATCCAACAACATGGTGAAGGCTCCTGGAGGAACTTGCCCAAGAATGCTGGATTGTTGAGGTGTGGGAAGAGTTGCAGACTGAGATGGATAAACTACTTGAGGGCAGATGTGAAGAGAGGAAACATTACTCCTGAAGAAGAAGAGATTATTGTCAAGTTGCATGCTGCTCTCGGCAACAGGTGGTCAGTGATAGCAGGACATTTACCAGGACGAACAGATAATGAGATAAAAAATTACTGGAACTCTCATTTAAGGAGAAAAATATACTGCTTCATCAAAACCTTAAACGAATCCTTCCCCTCTGTAAACGACATTGCTGCTTCCTCCAAACGAAGAGGTGGTCGGGTCAGGCCCACTCAGCCCACCACCAAGCTTAACAACCCAACTCCTGCGGCCCAAAATCTCCACTCAGGCAATAAGGTGTTTGAAAAAATGTCCAAACCATTCCCAAATCCACAAACTTGTGCCAATAATAATAATAATGCAGGACCTGAAGATAATCTTGATGAGACCATGGGACCTTATCAATGGCTAGACGATGAAATAAAGAGGTTAAGTTACATGTTGGAAAATGGGGTGTTTATGGACCCAAGTGAGAATTATGGGGAAGCAGAAAATGAATTAGTGCTGAGCGGAAATAATGACATGGTGGGGGGAGATTTGTATGAACTTGTTGGAAAGCAAATAATGGGACTAAGTGATGAGGATGTTCTGAGTAGAAACAGTAACGTTAATTCGTCAGAGATTTCGGTATATGATTATCAGTGGCTTGATGATTGGGATTATTACAATCAACAAGATCTTTGTGAAGAAGGGAATTTGAATGTGAATTGTTTGTGGGATGATGGAAATGGTGGAGAATCAGGGGGAAGCTTATGTTCATACTAA 972 0.4198 MVRAPCCEKVGLKKGRWTAEEDQILTQYIQQHGEGSWRNLPKNAGLLRCGKSCRLRWINYLRADVKRGNITPEEEEIIVKLHAALGNRWSVIAGHLPGRTDNEIKNYWNSHLRRKIYCFIKTLNESFPSVNDIAASSKRRGGRVRPTQPTTKLNNPTPAAQNLHSGNKVFEKMSKPFPNPQTCANNNNNAGPEDNLDETMGPYQWLDDEIKRLSYMLENGVFMDPSENYGEAENELVLSGNNDMVGGDLYELVGKQIMGLSDEDVLSRNSNVNSSEISVYDYQWLDDWDYYNQQDLCEEGNLNVNCLWDDGNGGESGGSLCSY 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3056 323 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 189 - -
Mibi01g3056 323 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi01g3056 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mibi01g3056 323 SMART sant 66 114 IPR001005 -
Mibi01g3056 323 SMART sant 13 63 IPR001005 -
Mibi01g3056 323 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mibi01g3056 323 Gene3D - 71 116 - -
Mibi01g3056 323 CDD SANT 71 112 IPR001005 -
Mibi01g3056 323 MobiDBLite consensus disorder prediction 143 162 - -
Mibi01g3056 323 FunFam Myb transcription factor 11 67 - -
Mibi01g3056 323 MobiDBLite consensus disorder prediction 134 162 - -
Mibi01g3056 323 Gene3D - 13 66 - -
Mibi01g3056 323 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi01g3056 323 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mibi01g3056 323 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi01g3056 323 CDD SANT 16 61 IPR001005 -
Mibi01g3056 323 FunFam Myb transcription factor 71 116 - -
Mibi01g3056 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3056 Mibi-ChrMibi01 54129943 54133925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3056 1 315 MYB Transcription Factor Family AT5G49330 44.068 7.08e-80 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi01g3056 Myb_DNA-binding 7.3e-14 CL0123