Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3051 ATGATGGCAAATAACTTAACGGGGCAGCTCTTGGGGTCAGAGATACATGGATTCCATACAATGCAGGAGTTGGATGTTGGAATTATTATGGAGGAAGCAAGACGTAGATGGCTTCGTCCCAATGAGATTTATGCCATACTCTGCAATTACAAGCATTTTACCATCCATGTCAAGCCAGTGACTCTGCCCAAAAGTGGTACTATTGTATTATTTGACCGGAAGAAGCTTAGGAACTTTCGTAAAGATGGGCACAATTGGAAAAAGAAAAAGGATGGGAAAACTGTTAAAGAAGCTCATGAGCACTTAAAAGTTGGTAATGAAGAAAGGATCCATGTATACTATGCACATGGTGAAGAAAACCCAAACTTTGTTCGCAGATGTTATTGGTTGCTTGATAAGTATGTGAGTCTGGAGCATATTGTCCTTGTTCATTACCGTGAAACACAGGAGCCACAAGGTTCTCCAGTCACACCTCTATATTCAAATGCTAGTTCTCCCTCTGATCCAACAACACCATGGGTAGTATCAGAAGAATTAGATTCTGGGATCAACAAGGGATGCACTGGTGAGCTTAATGACAATTTAACAGTCAAAAGTCATGAACTCAGGCTTCATGAGATTAATACACTTGAATGGGATGACCTAGTGGTTACAAATGATATTACCGCCTCTACTACTTCCACTCCTACTGGAGGAAAGGTTCCATGTTTTCATCAAGAAAAACAAACTTTACTGAATGGAAATTCGAGCAGGGTAGTTAACAATCAATCTGCAGAATTTCATTCTTTTGATATTCTGAACAATTCAATTGATGGGAACAATAGTGCTCAATGCAATTTTCCTGAAAGTTTGAATCTTCAGACTGCCAGCAGGCAATTAAATTCAAATGTACAGAGTGAAGATTCTATCACCATGGGTGGTGGCAATTTTGTGAACAGTATCCTCAATGACACTCTACAAAGCCAGGACAGCTTTGGAAATTGGATAAACCATATCATTGCCGATTCACCGTGTTCTATTGATGACTCAGGTCTTGAATCCTCAGTTTCATCTGTTCAAGATTCATACTCTTCAGGATTGGATAATCATCAACCTTCTCTGCCAGAGCAATTATTTAATATCACTGATGTGTCTCCTGTCTGGGCATGCTCCACTGAGAAAACAAAGGTCCTAATAACTGGATTTTTTCATGATGACTATATGCACCTTGCGAAGTCCAATCTGTTTTGTATCTGTGGGGATGTACCTGTTCCTGCAGAAATTGTTCAAGTTGGTGCCTACCGCTGCTGGGTACCACCACATTCCCCTGGTTTTGTGAATCTCTATATGAGTCTTGATGGCCACAAGCCCATAAGTCAAGTTATTCGTTTGGAGTATCGTACTGCTGTTTTGCAAGATCCTGCTGCTTCCATTGAAGAGAGGTACAACAGGGAGGAGTTTCAACTTCAGATGAGGCTTGCATATTTGCTCTTTGCTACACACAAGAGTCTTGACGTTAACTCTAGTAAAGCATCGCCTGATGCACTGAAGCAGGCAAAAAAATTTGTCTCCAAGACATCATATATTTCCAAAAGTTGGCAATACTTGATTAAGTCTACTGAAGACCACAAAACTTCATTTCCACAAACGAAGGATGCCTTGCTTGAAATTGCATTGAAAACTAAACTAAAGGAATGGCTGTTGGAGAGAATTATTTTAGGCTGTCAGACTACTGAATTTGATGCCCAGGGTCAAGGTGTAATTCATTTGTGCTCGATTTTAGGATATACATGGGCTGTTTCATTATTTTCATGGTCTGGCTTTTCATTGAATTTCCGTGATAAGTTTGGATGGACAGCCCTGCATTGGGCAGCTTATTACGGAAGGGAGAAAATGGTTGCTGCTTTATTGTCTGCAGGGGCAAGGCCAAATCTTGTCACGGATCCTACTCCTCAACATCCTGGTGGATTTACTGCTGCTGATCTGGCTCAGATGAAGGGTTACAGTGGCTTAGCAGCTTATCTTTCGGAAAAGTCTCTGGTTGAGCAGTTCAATGACATGAGCATAGCAGGAAATATCAGTGGCTCACTTGAAACTACTGGCACTAGTGATCCCGTAAACTCTGAGAAGCTCAATGAGGAACAGCTGTACATGAAGGACACATTAACTGCTTACCGGACGGCTGCTGAGGCTGCAGCACGCATACAGGCTGCATTTAGGGAGCATTCACTAAAATTACGATCTCATGCAGTTGAACTTTTCAGTCCAGAGGCTGAAGCACGCCAAATAGTTGCAGCAATGAAGATTCAGCATGCTTTTCGAAATTTCGAGTCGAAGAAGTCTTTGGCAGCTGCTGCTCGCATCCAGTATACCTTCCGTACTTGGAAGACGCGTAGGGAATTTCTCAATATGCGACGCCAGGCAATCAAGATTCAGGCTGCTTTCCGGGCCTTCAAGGAGCGGAAGAACTACCGCAAAATCGTCTGGTCTGTTGGAGTGGTTGAGAAAGCAATCCTTCGGTGGCGTTTAAAGAGACGGGGCTTCCGTGGCCTACATGTAAGTCCTGTCCAAGAAAAGGTAGGTCAGAAGGAGGAAACAGAGTTTGTTACAGAGGAGGACTTTTTCCGGACGGGCAGGAAGCAAGCTGAAGAACGTGTTGAGAGAGCTGTGGTACGCGTTCAGGCTATGTTCCGCTCTAAGAAAGCACAAGTAGATTACAGGAGGATGAAGCTAGCCCATAATCAAGCAAAGCTGGAACTAGAATATGAAGAACTCCTCAATTCTGAGGTTGATATGGGAGTGAAGATATAG 2790 0.4272 MMANNLTGQLLGSEIHGFHTMQELDVGIIMEEARRRWLRPNEIYAILCNYKHFTIHVKPVTLPKSGTIVLFDRKKLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEENPNFVRRCYWLLDKYVSLEHIVLVHYRETQEPQGSPVTPLYSNASSPSDPTTPWVVSEELDSGINKGCTGELNDNLTVKSHELRLHEINTLEWDDLVVTNDITASTTSTPTGGKVPCFHQEKQTLLNGNSSRVVNNQSAEFHSFDILNNSIDGNNSAQCNFPESLNLQTASRQLNSNVQSEDSITMGGGNFVNSILNDTLQSQDSFGNWINHIIADSPCSIDDSGLESSVSSVQDSYSSGLDNHQPSLPEQLFNITDVSPVWACSTEKTKVLITGFFHDDYMHLAKSNLFCICGDVPVPAEIVQVGAYRCWVPPHSPGFVNLYMSLDGHKPISQVIRLEYRTAVLQDPAASIEERYNREEFQLQMRLAYLLFATHKSLDVNSSKASPDALKQAKKFVSKTSYISKSWQYLIKSTEDHKTSFPQTKDALLEIALKTKLKEWLLERIILGCQTTEFDAQGQGVIHLCSILGYTWAVSLFSWSGFSLNFRDKFGWTALHWAAYYGREKMVAALLSAGARPNLVTDPTPQHPGGFTAADLAQMKGYSGLAAYLSEKSLVEQFNDMSIAGNISGSLETTGTSDPVNSEKLNEEQLYMKDTLTAYRTAAEAAARIQAAFREHSLKLRSHAVELFSPEAEARQIVAAMKIQHAFRNFESKKSLAAAARIQYTFRTWKTRREFLNMRRQAIKIQAAFRAFKERKNYRKIVWSVGVVEKAILRWRLKRRGFRGLHVSPVQEKVGQKEETEFVTEEDFFRTGRKQAEERVERAVVRVQAMFRSKKAQVDYRRMKLAHNQAKLELEYEELLNSEVDMGVKI 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3051 929 ProSiteProfiles Ankyrin repeat region circular profile. 609 637 - -
Mibi01g3051 929 Gene3D - 772 821 - -
Mibi01g3051 929 ProSiteProfiles Ankyrin repeat profile. 609 641 IPR002110 GO:0005515
Mibi01g3051 929 SUPERFAMILY E set domains 373 459 IPR014756 -
Mibi01g3051 929 SMART iq_5 773 795 IPR000048 GO:0005515
Mibi01g3051 929 SMART iq_5 878 900 IPR000048 GO:0005515
Mibi01g3051 929 SMART iq_5 796 818 IPR000048 GO:0005515
Mibi01g3051 929 ProSiteProfiles IQ motif profile. 776 803 IPR000048 GO:0005515
Mibi01g3051 929 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 25 908 - -
Mibi01g3051 929 Pfam Ankyrin repeats (3 copies) 561 638 IPR002110 GO:0005515
Mibi01g3051 929 FunFam calmodulin-binding transcription activator 5 539 679 - -
Mibi01g3051 929 ProSiteProfiles IQ motif profile. 880 908 IPR000048 GO:0005515
Mibi01g3051 929 MobiDBLite consensus disorder prediction 151 172 - -
Mibi01g3051 929 Gene3D - 533 678 IPR036770 -
Mibi01g3051 929 ProSiteProfiles CG-1 DNA-binding domain profile. 26 154 IPR005559 GO:0003677
Mibi01g3051 929 Pfam CG-1 domain 32 147 IPR005559 GO:0003677
Mibi01g3051 929 SUPERFAMILY Ankyrin repeat 548 671 IPR036770 -
Mibi01g3051 929 SMART CG_1_2 29 149 IPR005559 GO:0003677
Mibi01g3051 929 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 717 824 IPR027417 -
Mibi01g3051 929 FunFam Calmodulin-binding transcription activator 5 368 464 - -
Mibi01g3051 929 SMART ANK_2a 609 638 IPR002110 GO:0005515
Mibi01g3051 929 Pfam IQ calmodulin-binding motif 776 794 IPR000048 GO:0005515
Mibi01g3051 929 Pfam IQ calmodulin-binding motif 799 818 IPR000048 GO:0005515
Mibi01g3051 929 Gene3D Immunoglobulins 368 463 IPR013783 -
Mibi01g3051 929 ProSiteProfiles IQ motif profile. 797 821 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3051 Mibi-ChrMibi01 54014675 54024103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3051 29 912 CAMTA Transcription Factor Family AT3G16940 54.167 0.0 920
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Mibi01g3051 Ank_2 1.2e-06 CL0465