Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3011 ATGTCCATCTTGTACTATTGCCTTGCAGCTGTAGGAACAGCAGCCTTAGTATTAGCAGTATACAACCTTATCATCTTCAAACGCTGCCGCCGCCGCCATGCCCAATCATCACCTTCATCATCTTCTTCATCCTCATCACAACCTTCAAATAATCGTGTAACTGAGGTAGCAGTGGCAACAAGAAGTAATTTTGACATAAGATTGAGCAGAAACATATTACTATCAAGCTTCAAGTACAAGAAAGAATCAGAAGGAGAAGGAGGGTGTGAATGCCCAGTTTGTCTTTGTGGGTTTGAGGAAGGAGAAGAGGTAAGGAAGTTACCAAGGTGTAAGCATAGGTTTCATGCTCTATGCATAGACATGTGGCTTTTCTCTCACTTTGATTGCCCTCTTTGTCGAACCCCTGTTCTCCAATTTTGCCAGCTTTTTCCTCCTCCGCCGCCACCTGCGACTTCTCGTGAAGAAGGCTTTCTCCGATCTGCCATTAATGGCGGCGTCTCTGTTTGA 507 0.4497 MSILYYCLAAVGTAALVLAVYNLIIFKRCRRRHAQSSPSSSSSSSSQPSNNRVTEVAVATRSNFDIRLSRNILLSSFKYKKESEGEGGCECPVCLCGFEEGEEVRKLPRCKHRFHALCIDMWLFSHFDCPLCRTPVLQFCQLFPPPPPPATSREEGFLRSAINGGVSV 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3011 168 SMART ring_2 91 132 IPR001841 -
Mibi01g3011 168 Pfam Ring finger domain 90 133 IPR001841 -
Mibi01g3011 168 ProSiteProfiles Zinc finger RING-type profile. 91 133 IPR001841 -
Mibi01g3011 168 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 139 IPR013083 -
Mibi01g3011 168 SUPERFAMILY RING/U-box 90 145 - -
Mibi01g3011 168 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 7 136 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3011 Mibi-ChrMibi01 53515274 53515780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3011 7 136 C3H Transcription Factor Family AT5G17600 36.154 1.45e-20 85.1