Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g3010 ATGGACAAGAAGACTTCAGAAAACGAAGTCATTCTACAAATCCAAGAAAAGGAAGAAGCTTCTTCGTCCACGACCAAGAAAGAATCCCAGATGGACTCTTCACCGGAAATAAGAAACGTCAGCCCAAATCACAGTAAGCCCCCAAAAATTCCGACAGAGACATTAATGAAACGAAGGTCACTGCCAAGGTCGGAATTTTCGAAGCCAAAATCCAGATTAGTGGAGCAGCCGCCATATCAGTGTGACCCCAAATTTCTCGAAGGAAAAACCCAAATGGTAGGTTATGATTCATCATCTAATGGGAACTCTCCAAATGTGACTTCTTCACCTATGAAAAAAAACACAACTCCTCCTAGAAGTAATGTCAGTACAGCTCCAGTTACCCCGCGAACGCCATTGATTGGAATAGAGGCAGAGGAAGAAGATGAAGATGAACAAGTTTATAAAACTGCTGATCTTGAAATGAGCAAGAGATCAGGTAAGAAGAAGCTGAAACTAATGGCTTTAATTGAAAGTGGTGCTTTTGTTTGCATAATTTCTGTTTTGATATCGAGCTTGACCGTTCATAAACTGCAAAATACTGTGATTTGGAGTTTGAATCTATGGAAATGGTGTGTTTTAGTGTTGGTGATTCTATGTGGGAGAATAATCACAGAGTGGTTCATAAACATTCTGGTTTTCTTGTTCGAGAGGAACTTCATATTCAAAAAGAAGGTTCTTTATTTTGTTTATGGGCTAAAGAAGAGTGTTCAGGCTTTCATTTGGTTAGCTTTGGTTCTTCTGACTTGGTTTCTTCTGTTCAATCATGGAGTTGAACGATCCAGAAGGGCCAGAAAGATTCTGAATTACATAACAAGAGCACTTGCTTCTTGCCTCATAGGTGCAGCTATATGGCTAATAAAAACTTTGTTCATAAAGCTACTATCTTCTTCTTTCCAATGCACCAGATTCTTTGACAGGATTCAAGAATCAATCATTCATCAGTACATTCTTCGAGTTCTCTCGGGTCCGCCATTGATGGAGATCGCTGAAATGATAGGGAAAAGTAGTGGGGATACTGGTCAATTAAGTCTTAGGATACTGGACAAAGAGAAGAAAGGAAAGAAAGAAGAGGTCATTGATGTGGACAAGTTGAAGAAGATGAAGCAAGACAAAGTTTCTGCTTGGACAATGAGGGGCTTAGTTAATGTGATAAAGAGTTCTGGTTTATCCACCATATCCGGTTCACTCGAAAGCTTTAATAATGATGACGAGGAAGGAGAGCTGAAAGACATGGAAATTAACAGTGAGTGGGAAGCAAAAGCAGCAGCTTATAGAATCTTCAAGAATGTAGCCAAGCCAAGAAATAAGTACATTGAAGAGGAAGATCTCTTGAGATTTATGAAGAGAGAGGAGGTAGAGAATGTGCTTCCTTTGATTGAAGGAGCTGCAGAAACTGGAAAGATAAAGAGAAAGTCCCTCAAGAACTGGCTGGTGAAAGTTTACTTGGAACGCAAGTCACTGGTGCATTCCTTGAATGATACAAAAACAGCTATTGATGAGCTGAACAAGCTAGCCTCAGTGGCTGTGCTCATAATAATCATCATAGTCTGGCTTCTTTTAATGGGACTTCTAACAACCCAGGTTCTTCTCTTTATTTCATCTCAGCTTTTAGTCTCTGTGTTCATTTTTGGAAACACAGCCAAGACTTTGTTTGAAGCCATCATATTCGTCTTTGTAATGCACCCTTTTGACATTGGAGATCGCTGCGTCATCGATGGTGTACAGATGACTGTGGAAGAGATGAACATATTGACGACAGTGTTCTTAAGATATGACAATGAGAAGATATTCTATCCAAATGCAATTTTAGCCACCAAACCAATAAGCAATTTTTACAGAAGCCCAGATATGAATGATTCAGTTGAATTTGCTGTTGATGTTTCTACCTCAATGGAGACCATTGGTGCTTTGAAAGCTTCAATAAAAGCATATTTGGAGGGGAAGCCTCAGCATTGGCGTGCAGGGCACAGTGTGGTTGTGAAGAACATAGAGAATGTGAACAAGATGAATATGGCTTTGAATGTGACTCACACCATTAATTTCCAAAATTATGGAGAGAAGAACAGCAGAAGATCAGAGCTAGTTTTGGAATTGAAGAGAATTTTCCAAAATCTTAATATTACATACCATCTTCTTCCTCAAGATGTGAATCTCAGTTATGTGGGACCTGATGCACCTTCTACAGTTTGGAGATGA 2238 0.395 MDKKTSENEVILQIQEKEEASSSTTKKESQMDSSPEIRNVSPNHSKPPKIPTETLMKRRSLPRSEFSKPKSRLVEQPPYQCDPKFLEGKTQMVGYDSSSNGNSPNVTSSPMKKNTTPPRSNVSTAPVTPRTPLIGIEAEEEDEDEQVYKTADLEMSKRSGKKKLKLMALIESGAFVCIISVLISSLTVHKLQNTVIWSLNLWKWCVLVLVILCGRIITEWFINILVFLFERNFIFKKKVLYFVYGLKKSVQAFIWLALVLLTWFLLFNHGVERSRRARKILNYITRALASCLIGAAIWLIKTLFIKLLSSSFQCTRFFDRIQESIIHQYILRVLSGPPLMEIAEMIGKSSGDTGQLSLRILDKEKKGKKEEVIDVDKLKKMKQDKVSAWTMRGLVNVIKSSGLSTISGSLESFNNDDEEGELKDMEINSEWEAKAAAYRIFKNVAKPRNKYIEEEDLLRFMKREEVENVLPLIEGAAETGKIKRKSLKNWLVKVYLERKSLVHSLNDTKTAIDELNKLASVAVLIIIIIVWLLLMGLLTTQVLLFISSQLLVSVFIFGNTAKTLFEAIIFVFVMHPFDIGDRCVIDGVQMTVEEMNILTTVFLRYDNEKIFYPNAILATKPISNFYRSPDMNDSVEFAVDVSTSMETIGALKASIKAYLEGKPQHWRAGHSVVVKNIENVNKMNMALNVTHTINFQNYGEKNSRRSELVLELKRIFQNLNITYHLLPQDVNLSYVGPDAPSTVWR 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g3010 745 SUPERFAMILY Sm-like ribonucleoproteins 566 625 IPR010920 -
Mibi01g3010 745 Pfam Mechanosensitive ion channel 516 721 IPR006685 GO:0016020|GO:0055085
Mibi01g3010 745 Gene3D - 576 625 IPR023408 -
Mibi01g3010 745 FunFam Predicted mechanosensitive ion channel 576 625 - -
Mibi01g3010 745 PIRSF Memb_At2g17000 2 744 IPR016688 -
Mibi01g3010 745 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 17 735 IPR016688 -
Mibi01g3010 745 MobiDBLite consensus disorder prediction 92 128 - -
Mibi01g3010 745 MobiDBLite consensus disorder prediction 1 25 - -
Mibi01g3010 745 MobiDBLite consensus disorder prediction 1 132 - -
Mibi01g3010 745 MobiDBLite consensus disorder prediction 26 48 - -
Mibi01g3010 745 MobiDBLite consensus disorder prediction 51 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g3010 Mibi-ChrMibi01 53500895 53504024 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g3010 34 733 Mechanosensitive Ion Channel Family AT5G12080 52.415 0.0 733