Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2985 ATGAAAATTAGGGTTTCCTATAGTCCCCTATGGTATAAGAGGAACAAATCACAGCTCAACTTTCTTCTACACAGAGAAGGCCATCGGCGAGGCGAGAGTGAAGCTCCCATAACAGACGCCATGGTGAAGTACTCCAGGGAGCCGGAGAATCCTACTAAGTCCTGTAAGGCTAGAGGCTCTGACCTTAGAGTTCACTTCAAGAATACTCGAGAGACTGCCTTTGCCATCAGGAAGTTGCCCTTGGTCAAGGCTAAGAGGTATTTGGAGGATGTTCTAGCCCACAAACAAGCCATTCCATTCCGAAGGTTCTGTGGTGGAGTTGGCAGGACAGCCCAAGCTAAGAACAGACATTCCAATGGGCAAGGGCGCTGGCCTGTTAAATCAGCCAAATTCATTCTCGACTTGCTTAAGAATGCTGAGAGCAATGCTGAAGTGAAAGGTTTGGATGTGGATGCTCTCTACATTACTCATATCCAGGTTAATCAAGCACAGAAGCAAAGACGCCGCACCTACCGAGCTCACGGAAGGATCAACCCCTATATGTCATCTCCCTGCCATATTGAGCTTACTTTATCTGAGAAGGAAGAACCAGTGAGGAAGGAGCCGGAGACCCAGTTGGCTACAAGCAAGAAAGCTTAA 639 0.4789 MKIRVSYSPLWYKRNKSQLNFLLHREGHRRGESEAPITDAMVKYSREPENPTKSCKARGSDLRVHFKNTRETAFAIRKLPLVKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYITHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLSEKEEPVRKEPETQLATSKKA 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2985 212 FunFam 60S ribosomal protein L17 41 212 - -
Mibi01g2985 212 PANTHER 60S RIBOSOMAL PROTEIN L17 41 211 IPR005721 GO:0003735|GO:0006412|GO:0015934
Mibi01g2985 212 Hamap 50S ribosomal protein L22 [rplV]. 40 194 IPR005721 GO:0003735|GO:0006412|GO:0015934
Mibi01g2985 212 TIGRFAM uL22_arch_euk: ribosomal protein uL22 44 194 IPR005721 GO:0003735|GO:0006412|GO:0015934
Mibi01g2985 212 MobiDBLite consensus disorder prediction 193 212 - -
Mibi01g2985 212 Gene3D Ribosomal protein L22/L17 41 212 IPR036394 GO:0003735|GO:0005840|GO:0006412
Mibi01g2985 212 ProSitePatterns Ribosomal protein L22 signature. 167 191 IPR018260 GO:0003735|GO:0005840|GO:0006412
Mibi01g2985 212 SUPERFAMILY Ribosomal protein L22 41 194 IPR036394 GO:0003735|GO:0005840|GO:0006412
Mibi01g2985 212 CDD Ribosomal_L22 55 191 IPR001063 GO:0003735|GO:0005840|GO:0006412
Mibi01g2985 212 Pfam Ribosomal protein L22p/L17e 57 191 IPR001063 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2985 Mibi-ChrMibi01 53144462 53148587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2985 41 211 Cytoplasmic Ribosomal Protein Gene Family AT1G27400 87.719 5.22e-113 318