Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2982 ATGGATATTGCAGAGGTTGAAGAAAATATGTTTGCAGCAAGTGATGCCAAGTTACATGGAGAATTGTGTAAGTCTCTTTCAGCAACATATTGCAAAGTATTGTCAATATTTCCATCTTTGGAAGCAGCTAGGCCCAGGAGCAAATCTGGGATCCAGGCACTATGTTCATTGCACGTGGCATTAGAGAAGGCCAAGAATGTTCTTCAGCATTGTTCTGAGTGTAGTAAGCTTTATTTGGCTATAACTGGGGATTCTGTTCTTCTAAAATTTGAGAAAGCTAAATGTGCTCTTGAAACTAGTCTTAGAAGGGTGGAAGACATTGTTCCACAATCTATTGGATGTCAGATTGAAGAGATTGTGAGTGAACTAGAAACTATGGAATTGGCGCTTGAACCAATGGAGAAGCAAATTGGCGATAATTTAATTGCTTTGCTCCAGCAGGGAAGAAAGTTTAATGACTCTGCTGACAGTAGCGAGCTTGAATGTTTTCACCAGGCTGCTACTAGACTAGGGATCACTTCTTCTAGAGCAGCTCTTACTGAAAGAAGAGCTCTGAAGAAACATATTGATAGAGCTCGGGCTGAAGATGACAAGCGGAAGGAATCAATTGTTGCATATCTTTTACACCTTATGAGGAAATACTCTAAGTTGTTTAGAAGTGAGTTCTCAGACGATAATGATTCTCAGGGTTCTACTCCTTGTTCTCCCACTGTTATGGGCTCTATGGAAGACGGTGTTACTGGCGGTCAGTACCAGGCCTTTGACCGGCAGCTCTCAAAACTCAGTTCTTTTAATTTTAAGCCAAATAATAGAAGATCAGGGCAAATGCCTCTTCCCCCTGAAGAGTTAAGGTGTCCAATATCTCTTCAACTTATGTACGATCCTGTTATAATTGCTTCTGGGCAAACTTATGAAAGGGTTTGCATAGAGAAATGGTTGTGTGATGGGCACGACACCTGCCCAAAGACTCAACAGAAACTTGCACATTTATCATTGACCCCAAATTATTGTGTTAAGGGTCTTGTTGCTAGTTGGTGTGAACAGAATGGAGTTCCTATTCCTGATGGCCCTCCTGAATCTCTTGACTTTAACTACTGGAGATTAGCATTATCTCAGTCTGAATCAGCAAATTCAAGATCTATGAACAGTGTCAACTCTTGCAAGTTGAAGGGTGTCAAAGTGGTTCCTTTGGAAGAGACTGGGGTCTCGCATGAATCCGGAGAAAATGGAACTGAAAGTGTGTCTGCACAAGAGGAAGATACTGAGCAGTATCTTAGTTTTCTGAAAGTGTTGACTGAAGGGAACAGTTGGAAAAGGAAATGTAAAGTGGTAGAAAGGTTAAGGCTTTTGCTGAGGGATGATGAAGAAGCCAGGATTTTTATGGGGGCAAATGGGTTTGTTGAAGCATTTCTGCAGTTTCTGCAATCAGCAGTGTCTGAAGGGAATGCGATAGCTCAAGAAAGTGGAGCAATGGCCCTCTTTAACCTTGCTGTGAATAACAACAGGAATAAGGAGATCATGTTAGGAGAAGGAGTATTATCATTGCTAGAGGAAATGATCTCTAATTCCTACTCATATGGCTGTGCGACGGCCCTCTATCTGAATCTGTCTTGCCTTGAAGAAGCCAAGCCTATGATTGGCATGGGTCAGGCTGTCCAGTTCCTCATCCAGCTCCTCTGTCAACCTGATATTGAAGTCCTGTGCAAGCAAGATTCCCTTCACGCACTTTATAATCTTTCCACTGTACCCTCCAATATTCCAAACCTCCTTTCATCTGGCATCATTAATGGCCTTCAATCGCTCCTTGCGGGCCAGGGTGATTATGTGGGGACGGAAAAATGCATAGCTATTTTGATCAATCTGGCTTCTTCTCAGTTGGGAAGGGAGGAAATGATATCATCCCAGGGGCTCATAGGCGCGTTGGCTTCCATATTGGACACCGGCGAGCTCGTAGAGCAAGAGCAAGCTTTATCTTGTCTATTAATTTTATGTAATGGGAATGAAATATGTAGCCAGATGGTCCTTCAAGAAGGAGTAATACCTGCATTGGTGTCATTATCTGTGAATGGTACCTCAAGAGGCAGAGAGAAAGCTCAGAAACTCTTGATGCTGTTCCGAGAGCAGCGACAGCGAGACAATTCACCTCCTAAGACACAGCAGTTCCCACCGGAAACTAGTGATATAGAGATGCCACCTCCGGAGACAAAACCACTATGTAAGTCAATGTCTAGGAAAAAAATGGGAAGGGCTCTTAGCTTTTTATGGAAAACCAAGAGCTATTCTGTTTATCAGTGTTAG 2298 0.4278 MDIAEVEENMFAASDAKLHGELCKSLSATYCKVLSIFPSLEAARPRSKSGIQALCSLHVALEKAKNVLQHCSECSKLYLAITGDSVLLKFEKAKCALETSLRRVEDIVPQSIGCQIEEIVSELETMELALEPMEKQIGDNLIALLQQGRKFNDSADSSELECFHQAATRLGITSSRAALTERRALKKHIDRARAEDDKRKESIVAYLLHLMRKYSKLFRSEFSDDNDSQGSTPCSPTVMGSMEDGVTGGQYQAFDRQLSKLSSFNFKPNNRRSGQMPLPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWLCDGHDTCPKTQQKLAHLSLTPNYCVKGLVASWCEQNGVPIPDGPPESLDFNYWRLALSQSESANSRSMNSVNSCKLKGVKVVPLEETGVSHESGENGTESVSAQEEDTEQYLSFLKVLTEGNSWKRKCKVVERLRLLLRDDEEARIFMGANGFVEAFLQFLQSAVSEGNAIAQESGAMALFNLAVNNNRNKEIMLGEGVLSLLEEMISNSYSYGCATALYLNLSCLEEAKPMIGMGQAVQFLIQLLCQPDIEVLCKQDSLHALYNLSTVPSNIPNLLSSGIINGLQSLLAGQGDYVGTEKCIAILINLASSQLGREEMISSQGLIGALASILDTGELVEQEQALSCLLILCNGNEICSQMVLQEGVIPALVSLSVNGTSRGREKAQKLLMLFREQRQRDNSPPKTQQFPPETSDIEMPPPETKPLCKSMSRKKMGRALSFLWKTKSYSVYQC 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2982 765 SMART Ubox_2 282 345 IPR003613 GO:0004842|GO:0016567
Mibi01g2982 765 MobiDBLite consensus disorder prediction 706 741 - -
Mibi01g2982 765 SUPERFAMILY RING/U-box 277 355 - -
Mibi01g2982 765 SMART arm_5 454 498 IPR000225 GO:0005515
Mibi01g2982 765 SMART arm_5 538 581 IPR000225 GO:0005515
Mibi01g2982 765 SMART arm_5 624 665 IPR000225 GO:0005515
Mibi01g2982 765 Gene3D - 413 755 IPR011989 -
Mibi01g2982 765 Pfam U-box domain 280 349 IPR003613 GO:0004842|GO:0016567
Mibi01g2982 765 CDD RING-Ubox_PUB 283 325 IPR045210 -
Mibi01g2982 765 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 278 352 IPR013083 -
Mibi01g2982 765 SUPERFAMILY ARM repeat 431 703 IPR016024 -
Mibi01g2982 765 FunFam RING-type E3 ubiquitin transferase 278 352 - -
Mibi01g2982 765 ProSiteProfiles U-box domain profile. 278 352 IPR003613 GO:0004842|GO:0016567
Mibi01g2982 765 PANTHER U BOX DOMAIN-CONTAINING 23 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2982 Mibi-ChrMibi01 53078671 53082500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2982 1 764 U-box Gene Family AT1G24330 67.137 0.0 1050