Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2976 ATGGCTGCTGGGAGGCATGGAGGCTATCGCGACAACGGATTTAGGGATCGTGAGTCCAGTTTAGATGTCTCAAGACAGGGTTATGCTAATTCTGAAGAAGATTACGATCGGATTAGGACTGGTAGCCGAGATAGTGTGAGAGGTGGGGACACTGATGCAAGAGAGAGGATTAGAGTGAGGCAGAAGGATGTGAGGGAGAGAGAGGCGATGAATGGAAGCTACCACTCATCTTCAAGTAGGAGTGACTCGGGGAGTAGCAGTGGTGGTCTTGGTCCTAGAAAATGTGGTTTTTCTGTCAAGGCAACTGATAGAGAGCCAGGTGAGCTTTCGAGTGACAGTGGTTCTGATGAAGCTGTTGAATCAGAACCACTGGGGAAAGGCGTTGACCTTACCAAGGTTGAAAAAAATGGGACCCAGTCTCCATTGCAGAGGAAAAGAAAATTTTCACCAATAGTGTGGGATCAGGATGACAAAGAAGGCAATGATTCATCCAAACTTAAGGTGCCTAAAACTTTGACTACTCTTCCTCCTCCACCACCACTGCCCAAAGCATTCCGTCAGTCGCCTAATGCTCCATTAGGTGGGGTGGAGATACTTCCAGTTAACAATAGAGAAGCTGAGAGTCTTGAGTTGCCTACAGAAGTGAAACCTCCTCTGTCCCCTGAGACAGTTCAGGATGTTGATGCTGAGCCTACTGTGAGAGCTCGTCCTTTGTCACCAGATCAAAATTTGGGCAGCAATCTGGATGCTGAGCAGCTAGAGGGTGATGACTATATGCCTATGCATAATATATCATCTTCAAGATGGGCAGCTGGGGATAACTCTCCTGGGGATGAGGGTGAAATTGTAGATGATGATGATGAATTTTATAAAAAGAAGAGGAAGTTGACGCCTGAGTTCTTGAATACCAGAGTACGGAACAAGCTGTTGAGCCCAGAGGAATCAAGAAGAGATGGTTATGAAGCAGCTAGAGCTAAATCATCTGAATCTGAAGAAAGAGGTAACCATGGCAAAATCTCCACCGGTGATGATCATATTGGTATTGGATCTGATAAGGATGATTATATGGAAATTGATGGTCGTGTTAAAAGTGAAACCACTGTTAGCCACTCAGATACCGCATCTGAGGATGAAGATGATGGACGGGAGACTCCAGAGCCTCCAGTTCCACCACAAAGAGTTGTCAACATGCTTCAGGGCTGTAGAAGTGTTGATGAGTTTGAGAGACTGAACAAGATAGATGAAGGAACATATGGTGTTGTATATAGGGCCAAAGATAAGAAGACTGGGGAAATTGTAGCATTGAAGAAGGTGAAGATGGAGAAAGAAAAAGAGGGCTTCCCCCTTACTTCTTTAAGGGAAATAAACGTTCTACTTTCTTTTCACCACCCATCAATAGTTGATGTTAAAGAAGTAGTAGTAGGTAGCAACCTTGATAGTATTTTTATGGTGATGGAATACATGGAACATGATCTTAAAGGACTGATGGAGGCAATGAAGCAGCCATTCAGCCAGAGTGAAGTGAAGTGCCTTATGCTCCAGCTTTTAGAAGGTGTGAAGTATCTTCATGACAACTGGGTGCTTCATAGGGATTTGAAAACTTCTAACCTGCTTTTGAATAATAGGGGCGAGTTAAAAATTTGTGATTTTGGGTTGGCCCGTCAGTATGGTAGTCCACTGAAAACTTACACACACCTGGTTGTTACTCTTTGGTACAGGGCGCCAGAGCTTCTTCTGGGGGCAAGACAGTATTCGACAGCCATTGACATGTGGTCCTTGGGTTGCATAATGGCTGAGCTATTGTCCAAAGAACCACTGTTCAACGGGAAGACTGAATTTGATCAAATTGACAAGATTTTCCGTATTCTTGGGACACCAAATGAAACGATCTGGCCTGGCTTCTCAAAATTACCTGGAGTGAAAGTCAACTTTGTCAAGCATCAGTATAACCTTCTGCGCAAAAAATTTCCTGCCACATCATTCACTGGATCTCCAGTTCTCTCCGATTCTGGATTTGATTTGTTGAACAAGCTTCTTACATATGACCCTGAGAAGAGGATCACGGCCGAAGAAGCTCTCAATCATGAGTGGTTTCGTGAAGTTCCTCTGCCCAAGTCTAAAGAATTCATGCCTACTTTCCCTGCTCGACATGCTCAAGAGAGGCGGACTCGGAGACTATTAAAGAGTCCTGATCCTGTGGAGGAGCAGCGTCGAAAGGAGTTGCAGCAGGGTGAATTAGGGACTGGTGGTATTTTTGGCTGA 2262 0.4474 MAAGRHGGYRDNGFRDRESSLDVSRQGYANSEEDYDRIRTGSRDSVRGGDTDARERIRVRQKDVREREAMNGSYHSSSSRSDSGSSSGGLGPRKCGFSVKATDREPGELSSDSGSDEAVESEPLGKGVDLTKVEKNGTQSPLQRKRKFSPIVWDQDDKEGNDSSKLKVPKTLTTLPPPPPLPKAFRQSPNAPLGGVEILPVNNREAESLELPTEVKPPLSPETVQDVDAEPTVRARPLSPDQNLGSNLDAEQLEGDDYMPMHNISSSRWAAGDNSPGDEGEIVDDDDEFYKKKRKLTPEFLNTRVRNKLLSPEESRRDGYEAARAKSSESEERGNHGKISTGDDHIGIGSDKDDYMEIDGRVKSETTVSHSDTASEDEDDGRETPEPPVPPQRVVNMLQGCRSVDEFERLNKIDEGTYGVVYRAKDKKTGEIVALKKVKMEKEKEGFPLTSLREINVLLSFHHPSIVDVKEVVVGSNLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKTYTHLVVTLWYRAPELLLGARQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQIDKIFRILGTPNETIWPGFSKLPGVKVNFVKHQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEEALNHEWFREVPLPKSKEFMPTFPARHAQERRTRRLLKSPDPVEEQRRKELQQGELGTGGIFG 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2976 753 SMART serkin_6 407 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2976 753 ProSiteProfiles Protein kinase domain profile. 407 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2976 753 MobiDBLite consensus disorder prediction 71 88 - -
Mibi01g2976 753 FunFam Cyclin-dependent kinase G-2 490 729 - -
Mibi01g2976 753 MobiDBLite consensus disorder prediction 149 165 - -
Mibi01g2976 753 SUPERFAMILY Protein kinase-like (PK-like) 399 704 IPR011009 -
Mibi01g2976 753 PANTHER CELL DIVISION PROTEIN KINASE 405 704 - -
Mibi01g2976 753 Gene3D Phosphorylase Kinase; domain 1 392 489 - -
Mibi01g2976 753 MobiDBLite consensus disorder prediction 717 742 - -
Mibi01g2976 753 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Mibi01g2976 753 Gene3D Transferase(Phosphotransferase) domain 1 490 729 - -
Mibi01g2976 753 MobiDBLite consensus disorder prediction 172 186 - -
Mibi01g2976 753 MobiDBLite consensus disorder prediction 29 70 - -
Mibi01g2976 753 MobiDBLite consensus disorder prediction 286 301 - -
Mibi01g2976 753 FunFam cyclin-dependent kinase G-2 isoform X1 392 489 - -
Mibi01g2976 753 MobiDBLite consensus disorder prediction 1 393 - -
Mibi01g2976 753 MobiDBLite consensus disorder prediction 717 753 - -
Mibi01g2976 753 CDD STKc_CDC2L1 401 698 IPR045267 GO:0004674|GO:0005524|GO:0006468
Mibi01g2976 753 Pfam Protein kinase domain 407 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2976 753 MobiDBLite consensus disorder prediction 309 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2976 Mibi-ChrMibi01 53037856 53041017 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2976 398 746 Core Cell Cycle Gene Families AT5G10270 44.780 1.10e-95 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Mibi01g2976 Pkinase 6.6e-76 CL0016