Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2958 ATGAGGATAGCTTCAGTGGTCCTTCTTGAAGGAGTTCCTAACAGAGACAGACAGACAGACAGAGATGTAGAGTTAAATAGTTCAGTGAATATGAATAAGAATGCGCTATCTTCTCGACGCGATGCTTTCCCTGCTGGTCTCAGAGTTCTTGTCGTCGATGACGATTTGACATGGCTCAGGATTCTTGAGAAGATGCTCAAGAAGTGCTCTTACGAAGTGACTACATGTTGTTTAGCAAGAGAGGCTCTAAATTTGCTTCGTGAAAGGAAAGATGGATATGACATTGTGATCAGTGATGTAAATATGCCGGACATGGACGGTTTTAAACTTCTTGAGCATGTCGGACTTGAGATGGATCTTCCTGTGATCATGATGTCTGTGGATGGAGAAACAAGGAGGGTGATGAAGGGCGTTCAGCATGGAGCATGTGATTACCTCCTCAAGCCTATTAGGATGAAGGAGCTGCGAAACATATGGCAACATGTGTTCAGAAAAAGAATGCGCGAGGCAAGAGAGTTTGGAAGTCTCAAGGGTTTTGAGGGGTTTCAATTAATGAGAAATGGAGAAGATCAGTTTGATGAAGGGAACTTGTTTGCTATAGAAGATATGACCTCAACAAAGAAAAGGAAAAGCCCAGACAGCAAACGTGATTGCAAGGAATTTGGAGATCATTCTTCTGCAAAGAAAGCCAGAGTAGTTTGGTCTGTGGATCTTCATCAGAAATTTGTCAAGGCTGTGAATCAGCTTGGATTTGATAAAGTTGGTCCGAAGAAAATACTTGATTTGATGAATGTTCCGTGGTTGACACGGGATAATGTTGCTAGCCACTTGCAGAAATACCGGCTCTATTTGAGTAGGTTGCAGAACACTGGAGATCAAAATTCTTCCTCAAGTGGGGTTCAGCAATCTGATTTAGTGTCAAAAGATCCTGCCGCAAATTTCTCTTTGCAGAACTCAATAAACAGGCAACAAAATGACGTTTCAATTGACAGCCAAAAATATTCAGATGCAGCGTTACAACTTCAGAATATGGATGCAATAAGTCGTCAGGAAAGTAATCTCAAGGGAATCGTCGCAGAGGCTACAACGGATAAAAGAACGGACTCACCTGCCAACATTCAAGATGCTAAATCAAGAAAGAGTGCACAGAAGGCCAATGATAGGTCTTTTGCACCTCCAGATTCAGCATTAGAGTGCACCAACCCTTGGAGGGAATTCCCAGAAATGCACCTCAAAAAACACCAGCCTTATCTTCCAATGAAGGATCGCTTCGGCCACTTGCCATTACATGGTACAGAGCAACATCTCATCCAGGTTGATCAATCACAACAAGCAGATGCTTCAATTAGATCAGATCCATCAGTAATGGAGAGAGAAACTGCTGCCTGTATTGAAACCAGCCCTCTGTATGCTGATTACACCAGTTCTGTTAGTTCCATAGGAAGTGCTGGTGGCTTTTCCATGCAGTCCACGAGCTTTATGGGGAACAATGATAAATCTTTAGAACCCGTTTCAATTTCAAGTTTTGACAGGAAAACAGAGGGATTTAATCTTAATTCTACTTCTGACCTGGAGTTTCACCAACAAAACTTACTTTCAGGAGGTGAGTTTACTTCTGCTGCACCTTTGGATGAGGACTTGAAATCCTTTTGGATACAAGGTGAACGCTCTGGACTGCAGAATACAGAGATGCCAGAGTACTATTATGATCCAGGACTCACCGGGGAAGTTCCAATTCATTTGTTTGACGCAGCTGAATATTCTGCAGTAGATCAAGGCCTTTACATAGTATGA 1794 0.4247 MRIASVVLLEGVPNRDRQTDRDVELNSSVNMNKNALSSRRDAFPAGLRVLVVDDDLTWLRILEKMLKKCSYEVTTCCLAREALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETRRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKRMREAREFGSLKGFEGFQLMRNGEDQFDEGNLFAIEDMTSTKKRKSPDSKRDCKEFGDHSSAKKARVVWSVDLHQKFVKAVNQLGFDKVGPKKILDLMNVPWLTRDNVASHLQKYRLYLSRLQNTGDQNSSSSGVQQSDLVSKDPAANFSLQNSINRQQNDVSIDSQKYSDAALQLQNMDAISRQESNLKGIVAEATTDKRTDSPANIQDAKSRKSAQKANDRSFAPPDSALECTNPWREFPEMHLKKHQPYLPMKDRFGHLPLHGTEQHLIQVDQSQQADASIRSDPSVMERETAACIETSPLYADYTSSVSSIGSAGGFSMQSTSFMGNNDKSLEPVSISSFDRKTEGFNLNSTSDLEFHQQNLLSGGEFTSAAPLDEDLKSFWIQGERSGLQNTEMPEYYYDPGLTGEVPIHLFDAAEYSAVDQGLYIV 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2958 597 PANTHER TWO-COMPONENT RESPONSE REGULATOR 47 336 IPR045279 GO:0009736
Mibi01g2958 597 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 229 282 IPR006447 GO:0003677
Mibi01g2958 597 SUPERFAMILY Homeodomain-like 227 286 IPR009057 -
Mibi01g2958 597 Pfam Response regulator receiver domain 49 158 IPR001789 GO:0000160
Mibi01g2958 597 Gene3D - 47 211 - -
Mibi01g2958 597 Pfam Myb-like DNA-binding domain 231 281 IPR001005 -
Mibi01g2958 597 FunFam Two-component response regulator 225 288 - -
Mibi01g2958 597 Gene3D - 225 288 - -
Mibi01g2958 597 SMART REC_2 47 159 IPR001789 GO:0000160
Mibi01g2958 597 MobiDBLite consensus disorder prediction 360 396 - -
Mibi01g2958 597 ProSiteProfiles Response regulatory domain profile. 48 163 IPR001789 GO:0000160
Mibi01g2958 597 SUPERFAMILY CheY-like 46 170 IPR011006 -
Mibi01g2958 597 MobiDBLite consensus disorder prediction 365 379 - -
Mibi01g2958 597 CDD REC_typeB_ARR-like 49 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2958 Mibi-ChrMibi01 52800257 52804664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2958 41 293 Response Regulator Gene Family AT2G25180 54.297 6.66e-85 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mibi01g2958 Response_reg 1.8e-23 CL0304