Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2954 ATGTGGCAGAATCGTACCCATGATTCTTCTTCTTCTTGTTTGAGAGATTCTATTTTGGCTCTTGAAGCTGATATTGAACATGCCAATACCCTAGCAGCATCGCTAGCAGGAGGGTATGGAGGGGACCATTTTCAGATGAAACTATCATACAGTCCTTTGGCTCCTTTATTCCTTTACATGATCAAATGGATGGATTTCACTTGTACCCATTCTCTCCCCACTTCTCTTGGCTTATTCCACATCCTCATTTTCAAGGTGTACGGTGATGGAATACCATCTTTATCATCCAAAGAAAGAAAAGCATCCCTCAGAGATTTCTATGGTGTAATATACCCATCACTAAGGCAACTTGAAGGCGAGTTTAAAGCAGATGAAGCAAGAGATTATAATAGAAATAATTACACACAAATTATGAATAGAAAGAGCCTTAAGAAAGGGTTTGAAAATAAAGAACAAGAGTTGAGAGATGATGAATGTGGGATTTGCATGGAGATGAGCATGATCATGGTCCTCCCTAATTGTGGTCATTCCTTGTGCATCACCTGCTTCCATGATTGGAATGTGAGATCAGAGTCGTGCCCATTTTGCAGGGGAAGCCTAAAGAGGGTGAGTCCAAGAGATCTATGGGTTGTGATCGACAACACTGAAGTTGTTGACAGACTCACACTTGCCAAAGACAACCTCACTCGCCTCCATCTCTTCATTGATTCACTACCCCTTCTTGCTCACCACCATGATGCTCATGTCTTCCTCTTCAACTACATGCTTTAA 771 0.4163 MWQNRTHDSSSSCLRDSILALEADIEHANTLAASLAGGYGGDHFQMKLSYSPLAPLFLYMIKWMDFTCTHSLPTSLGLFHILIFKVYGDGIPSLSSKERKASLRDFYGVIYPSLRQLEGEFKADEARDYNRNNYTQIMNRKSLKKGFENKEQELRDDECGICMEMSMIMVLPNCGHSLCITCFHDWNVRSESCPFCRGSLKRVSPRDLWVVIDNTEVVDRLTLAKDNLTRLHLFIDSLPLLAHHHDAHVFLFNYML 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2954 256 Pfam Zinc finger, C3HC4 type (RING finger) 156 202 - -
Mibi01g2954 256 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 127 206 IPR013083 -
Mibi01g2954 256 SUPERFAMILY RING/U-box 141 202 - -
Mibi01g2954 256 ProSiteProfiles Zinc finger RING-type profile. 159 197 IPR001841 -
Mibi01g2954 256 PANTHER RING FINGER PROTEIN 41, 151 14 252 - -
Mibi01g2954 256 SMART ring_2 159 196 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2954 Mibi-ChrMibi01 52750764 52754584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2954 133 205 C3H Transcription Factor Family AT2G42030 32.099 5.63e-07 48.1