Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2930 ATGCCTATTGAATGTTCTACATTCGTCATTGGCTGGTACTATTGTTGTCTATCAATGATTCGTGGGAAGAAACTTCTGACAACCAAGGCACTGCTCATGGCTCCATCTAGAAAGTCCAAAAGTGTCACCAAGAGATTTTCAAATATTCGTGAAGCTGTATCTAATGAAGATAAAAACACGGAGAATGTTAGCAAGACTAGGCCACAGGGTAGTCCTGGAATTCAGAAGAAGAGAAAATTGGCTGACATGTTAGGACCACAATGGAGAAAGGAGGAGCTAGAGCGTTTCTATGAAGCTTTCCGTAAATATGGGAAAGACTGGAAGAAGGTGGCTGCTGCATTGCCTAATAGATCTTTGGAAATGGCAGAAGCTCTGTATTCTATGAATCGAGCATACTTGTCTCTTCCAGAGGGCACTGCTTCTGTGGTTGGACTCATAGCTATGATGACAGATCACTATAGTGTACTGGGAGGAAGTGATAGTGGACAAGAAACCATAGAAGATACAGAAACATTTAGAAAGCCTCCAAAAGTTTTGCGGTTGAAACGTTCAGATGCCAACTATAAAGCATTAGATGGACATTTCTCAGATCATTCTCAGTCACATTCAGTTACATCGGGTGATGGTTGCCTGTCATTGTTGAAGAAGAGTAATTCTGGAATAAGTTCTCATGCTGTTCGCAAAAGAACTCCCCGTGTCCCTGTTTCACATTCCATACACAAGGATATTGGTGAAAAGCATTTTTCACCTGCTAGGCAAGGTCACAGGCCAATGGTTGACAGTAATGATGTTGCTCATAAGATTGCATTAGCACTGACAGAGGCTTCACAAATGGGTGGATCTTCCAAAGTTTCTGGCTCACCAATCAATAAATCTAAGGGCATCATTTCATCACCTGGTCAGAACAATAGGAGGAAGAACACTAAATCAGAAGCAGCTGGATCCAAATTTTGCCATTCTGACTTGTATGAGGGTAGCTCTGAAATGAGGTTAGGAAGCACAGGGTGCGGTGATGGAGATTATTCCCAAAGACCGGGTCAACGGAGCAGCAGAGAAAGTGCTAGGAGAGGAATAAATGAAGAAAAGGGAACAAAACACTCCCGAAAAAAGTTAGAAATAAAAGAAAATGTGAACAAGCATTTGGATGGTGTAAAGGAAGCTTCTAGTGGAACAGACGAAGATAAAGGACTGGGTTTTATCAAGGATAAAATTGACACTAATTTTCCAGGCACAAAAGGTGCTAGGTCCTCTTTCAAGAGTTTCAGGAAGAAAAGTAAAAAAGTACCGCTTGATAAAAAGGATGAAGATTCTTCTTTTGATGCTCTGAAAGCCTTGGCTGATCTATCTTTGATGATGCCTATCACAAATCCTGATACCGAGTCTCCTGTTCGGGTGAAGGAGGAAAACCAAGGAGTTGTTGATGAGCCTAAAGTGGAAACCGATCATGCAATTCTGAGTGATGAAAGCACTGCTTTAAGTAAATTGGGTTGGGTTTCTCCTGATAATAGAGTTTTTGTTCCTCAAGAAGAGGGCACCTTCCCTCGAAAGAGGAAAAAGAGGCAAACATCTTCAATATCGAAAAATGATGTAACTTGTACCAGTTCTCATTTAAGTGGTTCACAGAAGATCAAGGTTACTGATGACATGGCAAAGTCTGTTGCCAAAGGTATGCTACCTTCCATTTCTAAGCAACAGTCAAGACAACTGAAGGTGGTACAACCCTCAGGAACAATGACTTCAAGTAATGATGAAAAAGGGGGACGGGATGACTCACTGCTATTACCCATAAAAGTTTCATCTACAGATAAAGCCGGTCTAGCAAACAAAGGAAGGCATAAGCGAAAGATGGGAGAGCCAAAGACAATGCTAGTACAAGATATAAAGGTGTCAGAAAATATTTTTAGCAGTCAACATAGAAAGTCCATTCTCCAGAACAGTGTATTAAGCCACAAGGAGAAGCTTATTCATTGCCTGTCTTCACATCAAATACGGCGATGGTGCACTTATGAGTGGTTTTACAGTGCTATAGATTACCCATGGTTTGCAAAAAGGGAGTTCATGGAGTACTTGGACCATGTTGGATTGGGGCATGTTTCTAGATTGAGTCGTATTGAGTGGGGTGTCATTAGGAGTTCTCTTGGCAGACCCCGTAGATTTTCTAAGCAATTTTTGATTGAAGAAAAAACAAAGTTAAATCAATACCGGGACTCAGTTAGAGCCTATTATGCAGAACTTCTTGCTGGTATCAGAGATGGCCTTCCAACTGATCTGGCCAAGCCATTAATTGTTGGACAACGTGTCATTGCTTTTCACCCAAAGACGAGAGAGATTCATGATGGGAGTATACTAACTGTCGACAACAGTACATGTCGGGTTCAGTTTGACCAGCCTGAACTGGGGGTTGAATTAGTCATGGATATTGACTGCATGCCTCTGGATCCTTATGAAAATATGTCAGCATCTCTGATAAGGCGCAATGTGATTCCTGCCAAACTAAATGGAAACCTTGTTGAGTTCAAGTGTAACGGAAAACTGAAAGAAGGAAAGATTGAGGAGCACAGAATATTGTCCCCTAGCGGGAAGTTAAATCATGTTGATGCTCTTTGTATACCCCCCTCAGCTCATGGCACCAACAATTTATTGAAACAGGGAAGTTCTTCAAGTTCCAAATTGCAAACTAATGTTGCTTGCAATGAGATTGGTAATGCTCTACTTTCAGCAAATTCTAAAGCTATGTTTCTTGAAAATGTTCCATCCAAAGAAGCTGGCACACATGCTGTTTTTGAGCTGACTCGTGCTCTTGACAAAAAGGAAATTGTGTTGTCTGAACTGAAGCAAATGAATGATGAGGCAACTGAAAGACGGAAATTTGGGGACCACTCTTTGAACGATGCTGAGCCATTTAAGAGGCATTATGCTGCAGTATTATTGCAGTTAAATGAAGTGAATGAGCAGGTCTCTTCTGCCTTGCTTTACATGAGACAGCACAATACATATCAGGGGAATGGCCATAATTTATCGCCGAGGCCCAAAGCTAATTCAGATGATCTAGGTGGTCAAGCTAGCTCTTCGTATTGCTCAGCTTCTCACAACCAAAATTGTCAATCCCATATAGCTGACATTATTGAAAGTTCTAAAAGAAAGGCCCTTACAATGGTTGGTGCAGCTATGCAGGCGATGTCATCTTTTAATAAGATAGAGGGTAAGGTTGAAGGAATTGAGGAGGCAATCGATTTTATAAATAATCGGCTTTCAGTGGATGTGCGTGGCGCTCCATCCTCACAATTCATGCCTACAGATTCTGTTCATGTCACTCTAGCTTCTCAGGGTCAGATGATTGCAAGTAAATCAAATCCTTTGCCAAATAATCACTCACAAGATCCTGAACTAAACAGCTCTTCTGATCAAAATGAAGTGAAAATTCCCTCTGAGCTTATTTCTCAATGTCTGGCTACTTTGCTGATGATCCAGAAGTGTACAGATCGACATTTCCCACCTGCCGATGTTGTACATGTACTAGATTCTGCAGTCACAAGTTTGCAGCCATTTTGTTCAAAGAATCTTCCAATATATGGGGAGATACAGAAATGCATGGGTATCATCAGGAATCAGATATTGGCACTCGTACCTACCCAAACTACCTAG 3645 0.4134 MPIECSTFVIGWYYCCLSMIRGKKLLTTKALLMAPSRKSKSVTKRFSNIREAVSNEDKNTENVSKTRPQGSPGIQKKRKLADMLGPQWRKEELERFYEAFRKYGKDWKKVAAALPNRSLEMAEALYSMNRAYLSLPEGTASVVGLIAMMTDHYSVLGGSDSGQETIEDTETFRKPPKVLRLKRSDANYKALDGHFSDHSQSHSVTSGDGCLSLLKKSNSGISSHAVRKRTPRVPVSHSIHKDIGEKHFSPARQGHRPMVDSNDVAHKIALALTEASQMGGSSKVSGSPINKSKGIISSPGQNNRRKNTKSEAAGSKFCHSDLYEGSSEMRLGSTGCGDGDYSQRPGQRSSRESARRGINEEKGTKHSRKKLEIKENVNKHLDGVKEASSGTDEDKGLGFIKDKIDTNFPGTKGARSSFKSFRKKSKKVPLDKKDEDSSFDALKALADLSLMMPITNPDTESPVRVKEENQGVVDEPKVETDHAILSDESTALSKLGWVSPDNRVFVPQEEGTFPRKRKKRQTSSISKNDVTCTSSHLSGSQKIKVTDDMAKSVAKGMLPSISKQQSRQLKVVQPSGTMTSSNDEKGGRDDSLLLPIKVSSTDKAGLANKGRHKRKMGEPKTMLVQDIKVSENIFSSQHRKSILQNSVLSHKEKLIHCLSSHQIRRWCTYEWFYSAIDYPWFAKREFMEYLDHVGLGHVSRLSRIEWGVIRSSLGRPRRFSKQFLIEEKTKLNQYRDSVRAYYAELLAGIRDGLPTDLAKPLIVGQRVIAFHPKTREIHDGSILTVDNSTCRVQFDQPELGVELVMDIDCMPLDPYENMSASLIRRNVIPAKLNGNLVEFKCNGKLKEGKIEEHRILSPSGKLNHVDALCIPPSAHGTNNLLKQGSSSSSKLQTNVACNEIGNALLSANSKAMFLENVPSKEAGTHAVFELTRALDKKEIVLSELKQMNDEATERRKFGDHSLNDAEPFKRHYAAVLLQLNEVNEQVSSALLYMRQHNTYQGNGHNLSPRPKANSDDLGGQASSSYCSASHNQNCQSHIADIIESSKRKALTMVGAAMQAMSSFNKIEGKVEGIEEAIDFINNRLSVDVRGAPSSQFMPTDSVHVTLASQGQMIASKSNPLPNNHSQDPELNSSSDQNEVKIPSELISQCLATLLMIQKCTDRHFPPADVVHVLDSAVTSLQPFCSKNLPIYGEIQKCMGIIRNQILALVPTQTT 1214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2930 1214 Gene3D - 20 140 - -
Mibi01g2930 1214 CDD SANT 88 121 IPR001005 -
Mibi01g2930 1214 MobiDBLite consensus disorder prediction 508 535 - -
Mibi01g2930 1214 Coils Coil 930 954 - -
Mibi01g2930 1214 Pfam Myb-like DNA-binding domain 87 119 IPR001005 -
Mibi01g2930 1214 MobiDBLite consensus disorder prediction 276 313 - -
Mibi01g2930 1214 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 118 IPR017930 -
Mibi01g2930 1214 MobiDBLite consensus disorder prediction 276 308 - -
Mibi01g2930 1214 MobiDBLite consensus disorder prediction 1114 1137 - -
Mibi01g2930 1214 PANTHER LIN-9 33 1213 IPR010561 GO:0006351|GO:0017053
Mibi01g2930 1214 Pfam DIRP 671 772 IPR033471 -
Mibi01g2930 1214 MobiDBLite consensus disorder prediction 558 582 - -
Mibi01g2930 1214 MobiDBLite consensus disorder prediction 53 77 - -
Mibi01g2930 1214 MobiDBLite consensus disorder prediction 557 590 - -
Mibi01g2930 1214 SUPERFAMILY Homeodomain-like 84 130 IPR009057 -
Mibi01g2930 1214 MobiDBLite consensus disorder prediction 461 475 - -
Mibi01g2930 1214 ProSiteProfiles Myb-like domain profile. 88 118 IPR001005 -
Mibi01g2930 1214 MobiDBLite consensus disorder prediction 453 475 - -
Mibi01g2930 1214 SMART DIRP_2 672 773 IPR033471 -
Mibi01g2930 1214 MobiDBLite consensus disorder prediction 329 368 - -
Mibi01g2930 1214 MobiDBLite consensus disorder prediction 349 368 - -
Mibi01g2930 1214 MobiDBLite consensus disorder prediction 1001 1024 - -
Mibi01g2930 1214 Pfam LIN9 C-terminal 927 996 IPR045831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2930 Mibi-ChrMibi01 52377446 52391116 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi01g2930 DIRP 8.5e-29 No_clan