Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2928 ATGTCCACCTCTGGAATGCTAGATTCTTCCTCCTCCTCCTCCTCATCAACATCACCATCCTCCTTCCAAGGCTATGAAGCAAACCAGACCCAGATGGTTCTGTCTCTTCTTCAGAGAAACACATCTCCTTGTTCTGGTGAGAAGAGAGGCAGGAGAAAGCAATCAGAACCAGGAAGATTTCTTGGTGTCAGAAGAAGACCTTGGGGTAGATATGCTGCAGAAATAAGGGACCCCACAACCAAAGAAAGGCATTGGCTTGGAACTTTTGACACTGCACAAGAAGCTGCTCTGGCTTATGACAGAGCTGCTCTGTCCATGAAAGGAAGCCAAGCAAGAACAAACTTCATATACTCTGACACTAACAACACTTCTTTTCACACTACTCTTCTTTCTCCATTACATGTTCAAGCCCTTTCACCAGCCTCCTATCACAGTAGTGCTACTGCAGTAGCATCTGATATGTCTTATCTTAACAACACTTCTAATTCCATTCCCACCCACCTTCATCATTATCATAATCAAATTGAGCCTAATCTTCCTACCCAGATTATGAACAATAATGACGTGCCTGAAACTGAGAACTTTTTCTTGTTTTCAAGTGATTCTAACTCAGGATACTTGGAATGTGTGGTTCCTGATAACTGTCTCAGAAGTAACAATGAGAGTAATGCTTCAAGTGATCACCAAAAAGGCCAATCTCATCATCAAGGAGGCAGCATCAAGATACCAACAATGGGATGTGAAAGTTCAGATTTTTCTGCATACCCAGATGAAATAACCTCTCAGGGACTGTCATGGGATTCTGATTGCAGTGAGCTTTCTGCTATATTCAAGAGCAACAACACAATGAGGGTTGAAGAAGAAGATGGGTGCTTCTTTGGGAGTAGTGGAATCGGTTCAAGCTATGGATTAATGACTGATCAATATGCTTCAGCTTCAGCTTCTTCTTCTTCTTCATATGCCTTTGGAGATGTTGATATGGGATACTCAATGTTCTGA 999 0.4224 MSTSGMLDSSSSSSSSTSPSSFQGYEANQTQMVLSLLQRNTSPCSGEKRGRRKQSEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGSQARTNFIYSDTNNTSFHTTLLSPLHVQALSPASYHSSATAVASDMSYLNNTSNSIPTHLHHYHNQIEPNLPTQIMNNNDVPETENFFLFSSDSNSGYLECVVPDNCLRSNNESNASSDHQKGQSHHQGGSIKIPTMGCESSDFSAYPDEITSQGLSWDSDCSELSAIFKSNNTMRVEEEDGCFFGSSGIGSSYGLMTDQYASASASSSSSYAFGDVDMGYSMF 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2928 332 ProSiteProfiles AP2/ERF domain profile. 59 116 IPR001471 GO:0003700|GO:0006355
Mibi01g2928 332 SMART rav1_2 59 122 IPR001471 GO:0003700|GO:0006355
Mibi01g2928 332 MobiDBLite consensus disorder prediction 1 25 - -
Mibi01g2928 332 MobiDBLite consensus disorder prediction 220 239 - -
Mibi01g2928 332 FunFam Ethylene-responsive transcription factor 2 59 117 - -
Mibi01g2928 332 MobiDBLite consensus disorder prediction 40 60 - -
Mibi01g2928 332 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 39 232 - -
Mibi01g2928 332 PRINTS Ethylene responsive element binding protein signature 60 71 IPR001471 GO:0003700|GO:0006355
Mibi01g2928 332 PRINTS Ethylene responsive element binding protein signature 82 98 IPR001471 GO:0003700|GO:0006355
Mibi01g2928 332 CDD AP2 59 115 IPR001471 GO:0003700|GO:0006355
Mibi01g2928 332 MobiDBLite consensus disorder prediction 220 240 - -
Mibi01g2928 332 Gene3D AP2/ERF domain 59 117 IPR036955 GO:0003700|GO:0006355
Mibi01g2928 332 SUPERFAMILY DNA-binding domain 60 117 IPR016177 GO:0003677
Mibi01g2928 332 MobiDBLite consensus disorder prediction 45 60 - -
Mibi01g2928 332 Pfam AP2 domain 62 108 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2928 Mibi-ChrMibi01 52346662 52347660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2928 1 325 AP2-EREBP Transcription Factor Family AT5G18560 36.883 8.53e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi01g2928 AP2 1.4e-12 CL0081