Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2923 ATGGGTCTGTTTGGAAATTGGTTTTGTAAGGGTGGCTTTCTTGTGTCTGGATTTGATATGGGTGGGTGTTTTCCTTGCTTTGGATCATCAAACAAGGACAAGGGATTGAAAGAAGTATCAGTCAAGAAGGATTCTTTTAAGGAAGGTTCAATTGTTGCTAAGTCTAACCACTCCAACAGGGTTAGCTCAGATAAATCAAAATCAAAAAGTGGCTCTGATCCTAAGAAGGAACCATCCATTCCCAAGGAACCAGCAGCCCATATTGCTGCACAAACATTCACATTTCGAGAGCTTGCAGCTGCTACAAAGAATTTCAGGCCAGAATGCTTATTAGGTGAAGGAGGATTCGGACGTGTCTACAAAGGTCGTCTTGAGAGCACCGGACAAGTTGTTGCTGTAAAACAGCTTGATCGCAATGGCCTTCAAGGAAATCGAGAATTCTTGGTGGAGGTTCTCATGCTTAGCCTCTTGCATCATCCCAATCTTGTCAACTTAATTGGTTATTGTGCTGATGGTGATCAGAGGCTTCTTGTTTATGAATTTATGCCATTGGGTTCCTTAGAAGATCATTTACATGATCTTCCTCCTGACAAGGAGCCTCTAGACTGGAACACAAGAATGAAAATTGCCGCTGGTGCTGCTAAGGGATTGGAATATTTGCATGACAAAGCAAATCCCCCTGTTATTTACAGAGACTTAAAGTCATCCAACATCCTCCTCGATGAGGATTATCATCCTAAGCTATCAGATTTTGGGCTTGCAAAGCTTGGTCCTGTTGGTGATAAGACTCATGTATCTACCCGAGTAATGGGAACATATGGCTACTGTGCTCCAGAGTATGCCATGACAGGCCAACTAACTTTGAAGTCCGATGTATATAGCTTTGGAGTTGTCTTTCTTGAACTTATCACCGGGCGCAAAGCTATTGACAATACCCGTGCACCTGGAGAGCATAATCTCGTTGCCTGGGCACGACCTCTTTTTAAAGACCGTAGGAAATTTCCAAAAATGGTTGATCCCCTACTTCAAGGGCGTTACCCAATGCGAGGACTCTACCAAGCACTTGCGGTTGCAGCCATGTGTTTGCAGGAACAAGCTGCTACAAGGCCTCTTATTGGGGATGTTGTGACTGCTCTCACATACCTGGCCTCACAGACATATGACCCAAATGCATCCAATCAGAACAGTAGAGTTGGAACCCCAAGGAGCAGGGATGACCGAAGGAGTGTGGCAGATGGCGTTATGGATAGCCCTGATCGCGGCCGGAGTGGCGGCTCCCCTTCCACTCATAGGAACTTGCCTGATGTCCAGAGGAGAGATAGTAGGGATCCAAGTGTTGGGAAAGATTTAGGCAGGAGTGAAACTGGATCTGGAAGAAGATGGGGATTGGATGATGTAGAAAGGCTGGAATCTCAGAGAGACAGCCCTGTAAATACTGGGAGGGCAAGGGAGACTCCGAGAAACCGTGATCTAGAGAGAGAACGTGCAGTTGCAGAAGCAAAAGTTTGGGGTGAGAATTGGAGAGAGAAAAAGAGGGCCAATGCAGTGGGTAGCTTTGATGCTACAAATGAGTGA 1575 0.4584 MGLFGNWFCKGGFLVSGFDMGGCFPCFGSSNKDKGLKEVSVKKDSFKEGSIVAKSNHSNRVSSDKSKSKSGSDPKKEPSIPKEPAAHIAAQTFTFRELAAATKNFRPECLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEDYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRAPGEHNLVAWARPLFKDRRKFPKMVDPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNASNQNSRVGTPRSRDDRRSVADGVMDSPDRGRSGGSPSTHRNLPDVQRRDSRDPSVGKDLGRSETGSGRRWGLDDVERLESQRDSPVNTGRARETPRNRDLERERAVAEAKVWGENWREKKRANAVGSFDATNE 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2923 524 MobiDBLite consensus disorder prediction 400 415 - -
Mibi01g2923 524 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Mibi01g2923 524 FunFam Serine/threonine-protein kinase PBS1 80 181 - -
Mibi01g2923 524 CDD STKc_IRAK 111 380 - -
Mibi01g2923 524 ProSitePatterns Protein kinases ATP-binding region signature. 111 134 IPR017441 GO:0005524
Mibi01g2923 524 Gene3D Phosphorylase Kinase; domain 1 78 181 - -
Mibi01g2923 524 Gene3D Transferase(Phosphotransferase) domain 1 182 403 - -
Mibi01g2923 524 SUPERFAMILY Protein kinase-like (PK-like) 82 379 IPR011009 -
Mibi01g2923 524 SMART serkin_6 105 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2923 524 PANTHER OS07G0668900 PROTEIN 23 392 - -
Mibi01g2923 524 Pfam Protein kinase domain 110 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2923 524 MobiDBLite consensus disorder prediction 387 493 - -
Mibi01g2923 524 MobiDBLite consensus disorder prediction 60 82 - -
Mibi01g2923 524 ProSiteProfiles Protein kinase domain profile. 105 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2923 524 MobiDBLite consensus disorder prediction 433 474 - -
Mibi01g2923 524 FunFam Serine/threonine-protein kinase PBS1 182 397 - -
Mibi01g2923 524 MobiDBLite consensus disorder prediction 50 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2923 Mibi-ChrMibi01 52263159 52268350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2923 23 414 Glycoside Hydrolase AT3G07070 62.374 7.38e-173 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mibi01g2923 Pkinase 2.8e-46 CL0016