Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2920 ATGGAAATGGAAGGCTCTGCCAATCAACGCCTTCACTTCGGCAAGATGGGATATGGGTGTAAGCATTATAGGAGAAGATGCATGATTCGAGCTCCTTGTTGCAATGAGATTTACTGGTGTCGTCATTGTCATAATGAGGCTGTGAGTATGTTGAGCAATGTCCATGATCGGCATGAATTAGTGCGCCAAGATGTCGAGCAAGTTGTTTGTGCAGTTTGTGACACAGAGCAACCAGTTGCTCAAGTTTGCACAAACTGTGGCGTCATGATGGGAGAATATTTCTGCGAAATCTGCAAATTCTTCGATGATGATACTGGGAAACAAGAGTTTCATTGTGATGATTGTGGGATCTGTAGAGTTGGTGGTCGTCAGAATTATTATCATTGCAAGAAATGTGGGTCCTGTTATTCAGTTGGCCTGCGTGATAATCATTCTTGTATAGAGAACTCTATGAGGCATCACTGTCCAATTTGTTATGAGTACCTTTTTGATTCATTGAAAGACACTACTGTAATGAAATGTGGTCATACAATGCACCGTGAGTGTTACCAAGAGATGATAAAGCGTGACAAGTATTGTTGCCCCATATGCTCCAAGTCAGTGAGCGATATGTCCAGTATATGGAAGAGAATTGATGAAGAGATTGAAGAAACAGTCATGCCTGAAGATTATCGGAACAGGAAGGTGTGGATACTATGCAATGACTGCAATGACACAACTGAAGTTTACTTTCACATTATTGGGCAAAAATGCGGACACTGCAGTTCATATAATACTCGTACAATTGCTCCTCCCGTTCTTCCTCAATGA 810 0.416 MEMEGSANQRLHFGKMGYGCKHYRRRCMIRAPCCNEIYWCRHCHNEAVSMLSNVHDRHELVRQDVEQVVCAVCDTEQPVAQVCTNCGVMMGEYFCEICKFFDDDTGKQEFHCDDCGICRVGGRQNYYHCKKCGSCYSVGLRDNHSCIENSMRHHCPICYEYLFDSLKDTTVMKCGHTMHRECYQEMIKRDKYCCPICSKSVSDMSSIWKRIDEEIEETVMPEDYRNRKVWILCNDCNDTTEVYFHIIGQKCGHCSSYNTRTIAPPVLPQ 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2920 269 ProSiteProfiles Zinc finger CHY-type profile. 13 88 IPR008913 GO:0008270
Mibi01g2920 269 ProSiteProfiles Zinc finger RING-type profile. 155 198 IPR001841 -
Mibi01g2920 269 Pfam Zinc-ribbon 203 260 IPR039512 -
Mibi01g2920 269 SUPERFAMILY RING/U-box 154 205 - -
Mibi01g2920 269 SUPERFAMILY Zinc hairpin stack 91 148 IPR037275 -
Mibi01g2920 269 Gene3D - 229 264 - -
Mibi01g2920 269 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 13 266 - -
Mibi01g2920 269 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 140 228 IPR013083 -
Mibi01g2920 269 SUPERFAMILY CHY zinc finger-like 17 89 IPR037274 GO:0008270
Mibi01g2920 269 Pfam Ring finger domain 154 197 IPR001841 -
Mibi01g2920 269 ProSiteProfiles Zinc finger CTCHY-type profile. 90 154 IPR017921 -
Mibi01g2920 269 SMART ring_2 155 197 IPR001841 -
Mibi01g2920 269 FunFam RING finger and CHY zinc finger domain-containing protein 1 226 268 - -
Mibi01g2920 269 Pfam CHY zinc finger 20 100 IPR008913 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2920 Mibi-ChrMibi01 52193413 52196498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2920 15 268 C2H2 Transcription Factor Family AT3G18290 39.768 1.55e-54 187