Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2914 ATGGGTTGTGTGTTCGGAAGAGAGTCGTCGTCGTCGTCGGCGGCGGCGAAGTTCGCCGGAGAGACGGTGGTATCTGAGAGGGAGGAGAGGAAAGAGGAGGTTTTGGCGGCGAAAGCGGAGGCGATTGAGGTTAGGAATGGCGGTGGTGGGAATAGGAAGGAAGGTGGGGAGGAGAAGAGTGGACGGCAGAGAGGGGAACGGCGGCGATCTTCACGGCCGAATCCGAGGCTGAGCAATCCGCCTAATCATGTGCACGGCGAGCAATTGGCGGCGGGGTGGCCGTCTTGGTTGTCTAAGGTTGCAGGGGAAGCCATCAATGGGTTGACACCTAGAAGAGCTGACACTTTTGAGAAGCTTGATAAGATTGGTCAAGGCACATACAGTAATGTATACAAAGCCAGAGACAATTTAACTGGGAAAATTGTTGCCTTAAAAAAGGTTAGATTTGACAATTTGGAGCCAGAGAGTGTGAAATTCATGGCCCGAGAGATTCTCATATTACGTCGACTGGATCATCCCAATGTTCTCAAACTGGAAGGTTTAGTGACTTCCAGAATGTCATGTAGCTTGTATCTTGTTTTTCAATACATGGAGCATGATCTGGCTGGACTTGCTACAAGCCCATCAATTAAGTTCACCGAGCCTCAGGTTAAGTGTTACATGAAGCAGCTGTTTTCTGGTCTGGAACACTGTCACGACCGTCACGTTCTTCATCGAGATATAAAGGGGTCAAACCTTCTTATTGACAATGAAGGGGTTCTTAAGGTTGCTGATTTTGGATTAGCTTCCTTCTTTGATCCTGATCACAAGCACCCTATGACAAGTAGGGTCGTGACTTTATGGTATCGACCTCCAGAACTTTTACTCGGGGCCACTGATTATGGTGTGGGAGTAGACCTCTGGAGTGCAGGTTGCATTCTTGCAGAATTGTTGGCTGGAAAGCCAATTTTGCCTGGTCGAACAGAGGTGGAGCAGCTACATAAGATATTTAAGCTATGTGGTTCTCCTTCTGAAGAATATTGGAAGAAGTCAAAGTTGCCTCATGCTACAATTTTTAAGCCGCAACAGTCGTACAAGCGATGCATATCAGATGTATTCAAAGATTTTCCACCATCATCCTTGCCACTAATTGAGACCCTTCTTGCTATTGATCCAGCTGAACGCCAGACTGCCACCGCTGCATTGCAAAGTGAATTCTTTACTACAAAACCTTATGCTTGTGAGCCATCTAGCCTCCCAAAATATCCTCCCAGCAAGGAGATGGATGCAAAGCTACGAGATGAAGAAGCTAGAAGATTGAGAGCTGCAGGTAAAGCTAATGCTGATGGTGTTAAGAGATCCCGTCCAAGAGACCGGGGAGGAAGGGGAATTCCAGTTCCAGAGGCCAATGCTGAGCTGCAAGCAAATATTGATAGACGGCGATTGATAACGCATGCGAATGCAAAGAGCAAGAGTGAGAAGTTTCCTCCGCCCCACCAAGACGGAACTCTAGGCTATACTCTTGGTTCTTCACATCACATGGATCCAGTTTTTGATCCTCCTGATGTTTCATTCAGCTCTACAAACCTGTCATATCCTAAAGCCAATATTCAAACATGGTCTGGTCCACTGGTGGAACCGGCTGGTGGCATGGGTGCCCCAAGGAGAAAGAAGAACATGGCAGGCGAGTCAAAATCGTCAAAGAAGGACTCTAAAAGATAG 1701 0.4744 MGCVFGRESSSSSAAAKFAGETVVSEREERKEEVLAAKAEAIEVRNGGGGNRKEGGEEKSGRQRGERRRSSRPNPRLSNPPNHVHGEQLAAGWPSWLSKVAGEAINGLTPRRADTFEKLDKIGQGTYSNVYKARDNLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVLKLEGLVTSRMSCSLYLVFQYMEHDLAGLATSPSIKFTEPQVKCYMKQLFSGLEHCHDRHVLHRDIKGSNLLIDNEGVLKVADFGLASFFDPDHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPILPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCISDVFKDFPPSSLPLIETLLAIDPAERQTATAALQSEFFTTKPYACEPSSLPKYPPSKEMDAKLRDEEARRLRAAGKANADGVKRSRPRDRGGRGIPVPEANAELQANIDRRRLITHANAKSKSEKFPPPHQDGTLGYTLGSSHHMDPVFDPPDVSFSSTNLSYPKANIQTWSGPLVEPAGGMGAPRRKKNMAGESKSSKKDSKR 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2914 566 Gene3D Transferase(Phosphotransferase) domain 1 199 439 - -
Mibi01g2914 566 SMART serkin_6 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2914 566 SUPERFAMILY Protein kinase-like (PK-like) 111 405 IPR011009 -
Mibi01g2914 566 MobiDBLite consensus disorder prediction 435 455 - -
Mibi01g2914 566 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Mibi01g2914 566 MobiDBLite consensus disorder prediction 1 18 - -
Mibi01g2914 566 MobiDBLite consensus disorder prediction 551 566 - -
Mibi01g2914 566 Pfam Protein kinase domain 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2914 566 MobiDBLite consensus disorder prediction 435 566 - -
Mibi01g2914 566 FunFam probable serine/threonine-protein kinase At1g54610 199 440 - -
Mibi01g2914 566 PANTHER CELL DIVISION PROTEIN KINASE 114 404 - -
Mibi01g2914 566 MobiDBLite consensus disorder prediction 515 531 - -
Mibi01g2914 566 ProSitePatterns Protein kinases ATP-binding region signature. 122 145 IPR017441 GO:0005524
Mibi01g2914 566 MobiDBLite consensus disorder prediction 1 87 - -
Mibi01g2914 566 ProSiteProfiles Protein kinase domain profile. 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2914 566 MobiDBLite consensus disorder prediction 467 489 - -
Mibi01g2914 566 MobiDBLite consensus disorder prediction 22 39 - -
Mibi01g2914 566 FunFam probable serine/threonine-protein kinase At1g54610 103 198 - -
Mibi01g2914 566 Gene3D Phosphorylase Kinase; domain 1 104 198 - -
Mibi01g2914 566 MobiDBLite consensus disorder prediction 50 73 - -
Mibi01g2914 566 CDD STKc_CDK9_like 116 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2914 Mibi-ChrMibi01 52143480 52148034 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2914 111 438 Core Cell Cycle Gene Families AT5G10270 52.616 3.17e-119 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mibi01g2914 Pkinase 1.3e-67 CL0016