Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2908 ATGGACTGCAATAGAGAAGAGGCCTTAAGGGCCAAGAATGTTGCAGAAAAGAAAATGGAAAACAAGGATTTCTCAGGGGCCCGTAAGATTGCTATAAAAGCTCAGCAACTATTTCCTGATCTGGAGAATATAGCTCAGATGCTTATTGTTTGTGATGTTCATTGCTCTGCGGACAAGAAATTTTGCAATGAAAAGGACTGGTATGGAATTCTTCAAGTAGAGCAGACAGCTGATGATGCAACAATTAGGAAACAATACAGGAAGTTTGCTCTTTTACTTCATCCTGATAAAAACAAGTTTGCTGGTGCTGAAGCTGCATTTAAGCTGATAGGGGAAGCTCAGGCAGTGCTGTTGGACAGACAGAAACGTGCTGCTCATGACAGAAACCGAAATTCGGGTTATCCTATGCAGAACATTTTTGTGAATGTTGATACTGGGGTGAAAAACCATATTAGGACCAATTTCACAAACCCGAGTCCTCAGCAGCATCAGTCTAGTCAGTCAGCAGCTCAGAAGGGATTTAATGACGGTTCCTTGACATTTTGGACAGTTTGCCCTTTCTGTTCTATTAGATTTCAATATTACTTAGAGGTTCTAAATAGATCTCTGCGTTGTCAAAGTTGCAACAGACCTTTTGTTGCATATGACATGAGTGTGCAAGGTACAGTTCCACCAACTTGTTCAAGTTCACAACCTTTTGTTTCTCAAAAAGATGGCCCAAATCATCACTCATTTAAGGTGGATGTTGGATCTCAAGGTAAGTCACATGGTAGAAATGTCAACAGAAAGCCTTTTGATAAGAAAAATCGTTCTTCCCATGTCTCTAGAAAGCTTAATGGAAAACGTCAGAGGGAGCAAGTAGTGGAAATTAGTGAAAGTTCTGATTCCATACACAGCTCTGATTCTGAAAGTGATATGGCTTCTGATGATATCATTTCTGATGAGGATGGTATCACTAATAAACGAAACCACACCTCTTTTAGAGAAGAGAATGCTCGTAGATCTACACGGAAAAAACAGCAGGTTTCCTACAAAGAAAATGCAAGTGATGATGACGATGACAACATAAACCTTTCAGAAAGGACAAACAGTCTGGCCGATGATGTAGAATTTCACGAGAAAGAGCAGAAGCATGGTCTGTATCCTGAAAAAATATCAGTGAGTAGAAAGGAGGAAACTAAGGAGGTGTTGGGAAAAGCAGTTGAAGGTTCAAAGACGACTGTTGAAGTTAGTGAGGATTGTGAACCGGATTTAGCCTGCAATGTGACAGAGGAGCCTAATATTATAGTCTGTCCTGATGCAGAGTTTAATGACTTTGACAAGGGCAAGAACAAAGATTGTTTTGCAGTTGGGCAGGTCTGGGCTGTTTATGATCCAAATGATAGCATGCCTAGATTCTATGCTCTAATTAGAAAAGTTTTTTCCTCTGGGTTCAAGCTGCGAATAACATGGTTTGAACCAGATCCGAGTGATGCAGATGAAATTAATTGGGTAAACAAGCAATTACCAGTTGCTTGCGGAAAGTATAGGCTTAGAGACTCTTTAACCACAGAAGACCATCCTATGTTTTCTCATCGAGTTTTGTGTGAAAAAATTGGACGTAATGCTTTTAAAGTTTATCCAAGAAAGGGAGAAACCTGGGCTCTGTATAAAAACTGGGATATCAAATGGTACATGGATGTGGAATCTCATCAGAAGTATGAATTCGAGTTTGTTGAAATCTTGACTGATTATGTTGAAGGTGTTGGTGTATTTGTTGTATATTTGGCTAAATTGAAAGGCTTCGTGAGTCTCTTCTCTAAAGTTACGAAGGAAGGCGCCTACCATATTAAAATTCCATCGGCAGAGTTATTCAGATTCTCTCACAGGGTTCCATCTTTTAAAATGACCGGTCAGGAAAGAGTAGGTGTTCCTGTAGGATCTTGGGAACTTGATCCTGCGGCTTTGCCTTCGGGTCTTGAAGAGGTTGCTGTTCCCAGTGATTTGGAAGTGAAGGCTGGTCATTCCCCATCCGGTGGTGTGAGTAGAAGATCTTCAAATAGATTGAAGCCCATGATGGCACCTGGTGGAAATTTGCATGCTTTCCAGGCAAATTTTGAATCAAGCAATTTGGCAAAGAACAATGGTTCAGCTAACTGTGTTGAAGGTTGCAGCGCTCCTTTGTCTTCAACCCCAGAAACTATGTTAATTCCAGATCCTCAATTCTACAATTTTGATGATGGGAAGTCTCCAGAGAAGTTTCAGCTTGGTCAGATTTGGGCATTTTATTGTGATGAAGATGGCCTGCCAAAATACTATGGTGAGATTACGAAAATCAGTAGGAGCCCAGGTCTTGAATTGCATATCACGTGGCTTGCTTCCTGCTGGCTACCAGAAAACACTATTAGATGGGAAGACAAAAACATGCTTATTTCTTGTGGCAGGTTTAGTAGTAAAAGTGGGAATTCAAAGGTTTATAAAGACACTGGCCCCCTTTCACATCAGGTAAGTGTTTATTTTGACATAAAGAGCAATGAATATTCCATCTTTCCAAGGAAGGGTGAAGTTTGGGCCTTATATAGGAAATGGACACCTAAAATCAAATGCTCTGATCTGGTAAACTGGGAGTATGACATAGTGGAAATTGTTGAAGAAACTGCTGCTTGGATAGAAGTATTAGTGATGGAGATTGTCAGTGGATATAAATCTGTTTTCAAGGCGAAAACGTTAGATGGATCAGCCATCACCATGAGAGTACCTCAGGCGCAGTTGCTGAGGTTCTCCCACCAAATCCCAGAATTCAAACTAACAGAGAAGCATGGCAAGCTGAAAGGCTTCTGGGAGCTTGATCCAGGAGCTGTACCCGTCCACTTTTGGACTTCCCAGTAG 2868 0.4097 MDCNREEALRAKNVAEKKMENKDFSGARKIAIKAQQLFPDLENIAQMLIVCDVHCSADKKFCNEKDWYGILQVEQTADDATIRKQYRKFALLLHPDKNKFAGAEAAFKLIGEAQAVLLDRQKRAAHDRNRNSGYPMQNIFVNVDTGVKNHIRTNFTNPSPQQHQSSQSAAQKGFNDGSLTFWTVCPFCSIRFQYYLEVLNRSLRCQSCNRPFVAYDMSVQGTVPPTCSSSQPFVSQKDGPNHHSFKVDVGSQGKSHGRNVNRKPFDKKNRSSHVSRKLNGKRQREQVVEISESSDSIHSSDSESDMASDDIISDEDGITNKRNHTSFREENARRSTRKKQQVSYKENASDDDDDNINLSERTNSLADDVEFHEKEQKHGLYPEKISVSRKEETKEVLGKAVEGSKTTVEVSEDCEPDLACNVTEEPNIIVCPDAEFNDFDKGKNKDCFAVGQVWAVYDPNDSMPRFYALIRKVFSSGFKLRITWFEPDPSDADEINWVNKQLPVACGKYRLRDSLTTEDHPMFSHRVLCEKIGRNAFKVYPRKGETWALYKNWDIKWYMDVESHQKYEFEFVEILTDYVEGVGVFVVYLAKLKGFVSLFSKVTKEGAYHIKIPSAELFRFSHRVPSFKMTGQERVGVPVGSWELDPAALPSGLEEVAVPSDLEVKAGHSPSGGVSRRSSNRLKPMMAPGGNLHAFQANFESSNLAKNNGSANCVEGCSAPLSSTPETMLIPDPQFYNFDDGKSPEKFQLGQIWAFYCDEDGLPKYYGEITKISRSPGLELHITWLASCWLPENTIRWEDKNMLISCGRFSSKSGNSKVYKDTGPLSHQVSVYFDIKSNEYSIFPRKGEVWALYRKWTPKIKCSDLVNWEYDIVEIVEETAAWIEVLVMEIVSGYKSVFKAKTLDGSAITMRVPQAQLLRFSHQIPEFKLTEKHGKLKGFWELDPGAVPVHFWTSQ 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2908 955 SMART dnaj_3 65 122 IPR001623 -
Mibi01g2908 955 MobiDBLite consensus disorder prediction 152 171 - -
Mibi01g2908 955 Gene3D DnaJ domain 62 181 IPR036869 -
Mibi01g2908 955 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Mibi01g2908 955 CDD DnaJ 66 119 IPR001623 -
Mibi01g2908 955 Pfam Domain of unknown function (DUF3444) 726 932 IPR024593 -
Mibi01g2908 955 Pfam Domain of unknown function (DUF3444) 426 633 IPR024593 -
Mibi01g2908 955 MobiDBLite consensus disorder prediction 259 305 - -
Mibi01g2908 955 SUPERFAMILY Chaperone J-domain 55 134 IPR036869 -
Mibi01g2908 955 PRINTS DnaJ domain signature 102 122 IPR001623 -
Mibi01g2908 955 PRINTS DnaJ domain signature 68 86 IPR001623 -
Mibi01g2908 955 PRINTS DnaJ domain signature 86 101 IPR001623 -
Mibi01g2908 955 Pfam DnaJ domain 66 127 IPR001623 -
Mibi01g2908 955 MobiDBLite consensus disorder prediction 225 359 - -
Mibi01g2908 955 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 948 - -
Mibi01g2908 955 MobiDBLite consensus disorder prediction 314 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2908 Mibi-ChrMibi01 52079651 52082518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2908 4 214 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.023 7.63e-30 120