Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2891 ATGACAGGAGTATATGTATCACAAACAAAGCTAGGGTTTTCTTCTCCAGAGAGAAAGTGTGAGGCGGAGGCAAAAACTCAGAGAGATCTCTCAAGAGAATCGTCAAAGATGGTGAAGTTCCTCAAGCAGAACAAGGCTGTGATCCTCCTTCAAGGTCGCTACGCAGGCCGTAAGGCCGTCATCGTCCGTACATTCGACGACGGCACTCGCGACCGCGCTTACGGCCACTGTTTGGTCGCCGGAATCAAGAAGTACCCAAGCAAGGTCATCAAGAAGGATTCCGCGAAGAAGACGGCGAAGAAGTCTAGGGTTAAGGCCTTCGTGAAGCTCGTGAATTACCAGCACCTCATGCCTACTCGTTACACTCTCGATGTGGATCTGAAGGATGTGGTTACCATCGATTCTCTTCAATCGAAGGACAAGAAGGTGACGGCCTTGAAGGAGACCAAGAAGAGGTTCGAGGAGAGGTTCAAGACTGGAAAGAACAGGTGGTTCTTCACCAAGCTTAGGTTTTGA 516 0.4981 MTGVYVSQTKLGFSSPERKCEAEAKTQRDLSRESSKMVKFLKQNKAVILLQGRYAGRKAVIVRTFDDGTRDRAYGHCLVAGIKKYPSKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTALKETKKRFEERFKTGKNRWFFTKLRF 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2891 171 FunFam 60S ribosomal protein L27 37 171 - -
Mibi01g2891 171 ProSitePatterns Ribosomal protein L27e signature. 160 171 IPR018262 GO:0003735|GO:0005840|GO:0006412
Mibi01g2891 171 SUPERFAMILY Translation proteins SH3-like domain 39 171 IPR008991 -
Mibi01g2891 171 Pfam Ribosomal L27e protein family 88 171 IPR001141 GO:0003735|GO:0005840|GO:0006412
Mibi01g2891 171 Gene3D - 37 171 IPR038655 -
Mibi01g2891 171 CDD KOW_RPL27 42 124 IPR041991 -
Mibi01g2891 171 Coils Coil 136 156 - -
Mibi01g2891 171 PANTHER 60S RIBOSOMAL PROTEIN L27 37 171 IPR001141 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2891 Mibi-ChrMibi01 51807461 51809044 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2891 37 171 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 85.926 4.94e-85 244